PWMs for HUMAN transcription factors from Class {4.1}
| Model | LOGO | Transcription factor | Model length | Quality | Consensus | Origin | wAUC | Best AUC | Benchmark datasets | Aligned words | TF family | TF subfamily | HGNC | EntrezGene | UniProt ID | UniProt AC | Comment |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HBP1_HUMAN.H10MO.D |  |
HBP1 | 9 | D | RnYSATTGA | HOCOMOCO v9 | 5 | SOX-related factors{4.1.1} | Further Sox-related factors{4.1.1.9} | 23200 | 26959 | HBP1_HUMAN | O60381 | ||||
| LEF1_HUMAN.H10MO.C |  |
LEF1 | 7 | C | CTTTGWW | HOCOMOCO v9 | 67 | TCF-7-related factors{4.1.3} | LEF-1 (TCF-1alpha) [1]{4.1.3.0.4} | 6551 | 51176 | LEF1_HUMAN | Q9UJU2 | ||||
| SOX10_HUMAN.H10MO.D |  |
SOX10 | 7 | D | bCWTTGT | HOCOMOCO v9 | 32 | SOX-related factors{4.1.1} | Group E{4.1.1.5} | 11190 | 6663 | SOX10_HUMAN | P56693 | ||||
| SOX11_HUMAN.H10MO.D |  |
SOX11 | 16 | D | RACAMTRhMATTGTYb | HT-SELEX | 220 | SOX-related factors{4.1.1} | Group C{4.1.1.3} | 11191 | 6664 | SOX11_HUMAN | P35716 | ||||
| SOX13_HUMAN.H10MO.D |  |
SOX13 | 8 | D | nATTGTKn | HOCOMOCO v9 | 5 | SOX-related factors{4.1.1} | Group D{4.1.1.4} | 11192 | 9580 | SOX13_HUMAN | Q9UN79 | ||||
| SOX15_HUMAN.H10MO.D |  |
SOX15 | 7 | D | CWTTGTT | HOCOMOCO v9 | 8 | SOX-related factors{4.1.1} | Group G{4.1.1.7} | 11196 | 6665 | SOX15_HUMAN | O60248 | ||||
| SOX17_HUMAN.H10MO.D |  |
SOX17 | 18 | D | MAMCAAWnhYYATTGTSv | HOCOMOCO v9 | 57 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 18122 | 64321 | SOX17_HUMAN | Q9H6I2 | ||||
| SOX18_HUMAN.H10MO.D |  |
SOX18 | 19 | D | SMWhnMATTGTYbWnnYYC | HOCOMOCO v9 | 8 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 11194 | 54345 | SOX18_HUMAN | P35713 | ||||
| SOX1_HUMAN.H10MO.D |  |
SOX1 | 16 | D | dRTSAATGKTATTCAK | HT-SELEX | 40 | SOX-related factors{4.1.1} | Group B{4.1.1.2} | 11189 | 6656 | SOX1_HUMAN | O00570 | ||||
| SOX21_HUMAN.H10MO.D |  |
SOX21 | 16 | D | dRWSAATGdYAKTSWb | HT-SELEX | 14076 | SOX-related factors{4.1.1} | Group B{4.1.1.2} | 11197 | 11166 | SOX21_HUMAN | Q9Y651 | ||||
| SOX2_HUMAN.H10MO.B |  |
SOX2 | 16 | B | YYWTTSTbMTKSWdWh | HOCOMOCO v9 | 0.9121766775418748 | 0.9121766775418748 | 1 | 678 | SOX-related factors{4.1.1} | Group B{4.1.1.2} | 11195 | 6657 | SOX2_HUMAN | P48431 | |
| SOX3_HUMAN.H10MO.D |  |
SOX3 | 13 | D | WvAATGnWATTbW | HT-SELEX | 2748 | SOX-related factors{4.1.1} | Group B{4.1.1.2} | 11199 | 6658 | SOX3_HUMAN | P41225 | ||||
| SOX4_HUMAN.H10MO.C |  |
SOX4 | 12 | C | CSCTTTGTTYTn | HOCOMOCO v9 | 8 | SOX-related factors{4.1.1} | Group C{4.1.1.3} | 11200 | 6659 | SOX4_HUMAN | Q06945 | ||||
| SOX5_HUMAN.H10MO.C |  |
SOX5 | 8 | C | bATTGTTh | HOCOMOCO v9 | 69 | SOX-related factors{4.1.1} | Group D{4.1.1.4} | 11201 | 6660 | SOX5_HUMAN | P35711 | ||||
| SOX7_HUMAN.H10MO.D |  |
SOX7 | 16 | D | RACAMTGhMATTGTYh | HT-SELEX | 700 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 18196 | 83595 | SOX7_HUMAN | Q9BT81 | ||||
| SOX8_HUMAN.H10MO.D |  |
SOX8 | 16 | D | WvACTGhAATTSWYbh | HT-SELEX | 4026 | SOX-related factors{4.1.1} | Group E{4.1.1.5} | 11203 | 30812 | SOX8_HUMAN | P57073 | ||||
| SOX9_HUMAN.H10MO.B |  |
SOX9 | 11 | B | bYYATTGTTYh | HOCOMOCO v9 | 158 | SOX-related factors{4.1.1} | Group E{4.1.1.5} | 11204 | 6662 | SOX9_HUMAN | P48436 | ||||
| SRY_HUMAN.H10MO.B |  |
SRY | 9 | B | bWTTGTWWh | HOCOMOCO v9 | 108 | SOX-related factors{4.1.1} | Group A{4.1.1.1} | 11311 | 6736 | SRY_HUMAN | Q05066 | ||||
| TCF7_HUMAN.H10MO.C |  |
TCF7 | 12 | C | RSWWCAAAGSdb | HOCOMOCO v9 | 16 | TCF-7-related factors{4.1.3} | TCF-7 (TCF-1) [1]{4.1.3.0.1} | 11639 | 6932 | TCF7_HUMAN | P36402 | ||||
| TF7L1_HUMAN.H10MO.D |  |
TCF7L1 | 16 | D | dddddhWhCSRGRvRv | HT-SELEX | 51 | TCF-7-related factors{4.1.3} | TCF-7L1 (TCF-3) [1]{4.1.3.0.2} | 11640 | 83439 | TF7L1_HUMAN | Q9HCS4 | ||||
| TF7L2_HUMAN.H10MO.A |  |
TCF7L2 | 13 | A | dbbCTTTSAWSYb | ChIP-Seq | 0.7879308926678483 | 0.8659823302599484 | 12 | 499 | TCF-7-related factors{4.1.3} | TCF-7L2 (TCF-4) [1]{4.1.3.0.3} | 11641 | 6934 | TF7L2_HUMAN | Q9NQB0 |