Model info
| Transcription factor | SOX10 | ||||||||
| Model | SOX10_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | D | ||||||||
| Consensus | bCWTTGT | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 32 | ||||||||
| TF family | SOX-related factors{4.1.1} | ||||||||
| TF subfamily | Group E{4.1.1.5} | ||||||||
| HGNC | 11190 | ||||||||
| EntrezGene | 6663 | ||||||||
| UniProt ID | SOX10_HUMAN | ||||||||
| UniProt AC | P56693 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.335 | 9.805 | 7.498 | 12.661 |
| 02 | 1.099 | 29.003 | 0.0 | 2.197 |
| 03 | 13.842 | 2.746 | 0.0 | 15.71 |
| 04 | 0.989 | 0.0 | 0.0 | 31.31 |
| 05 | 0.0 | 0.0 | 0.0 | 32.299 |
| 06 | 1.099 | 0.0 | 31.2 | 0.0 |
| 07 | 5.163 | 1.099 | 1.099 | 24.938 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.027 | 0.177 | -0.067 | 0.414 |
| 02 | -1.514 | 1.206 | -2.332 | -1.071 |
| 03 | 0.498 | -0.906 | -2.332 | 0.617 |
| 04 | -1.572 | -2.332 | -2.332 | 1.28 |
| 05 | -2.332 | -2.332 | -2.332 | 1.311 |
| 06 | -1.514 | -2.332 | 1.277 | -2.332 |
| 07 | -0.394 | -1.514 | -1.514 | 1.06 |