Model info
| Transcription factor | TCF7L2 | ||||||||
| Model | TF7L2_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Consensus | dbbCTTTSAWSYb | ||||||||
| wAUC | 0.7879308926678483 | ||||||||
| Best AUC | 0.8659823302599484 | ||||||||
| Benchmark datasets | 12 | ||||||||
| Aligned words | 499 | ||||||||
| TF family | TCF-7-related factors{4.1.3} | ||||||||
| TF subfamily | TCF-7L2 (TCF-4) [1]{4.1.3.0.3} | ||||||||
| HGNC | 11641 | ||||||||
| EntrezGene | 6934 | ||||||||
| UniProt ID | TF7L2_HUMAN | ||||||||
| UniProt AC | Q9NQB0 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 84.812 | 81.651 | 111.708 | 220.68 |
| 02 | 52.698 | 131.436 | 124.993 | 189.723 |
| 03 | 47.412 | 209.813 | 95.67 | 145.956 |
| 04 | 17.943 | 405.0 | 22.543 | 53.365 |
| 05 | 3.366 | 8.511 | 0.0 | 486.974 |
| 06 | 0.0 | 18.575 | 3.714 | 476.561 |
| 07 | 2.562 | 0.0 | 5.154 | 491.135 |
| 08 | 12.16 | 91.224 | 365.633 | 29.834 |
| 09 | 440.661 | 4.566 | 8.012 | 45.611 |
| 10 | 163.936 | 5.648 | 12.423 | 316.844 |
| 11 | 24.26 | 224.372 | 220.164 | 30.055 |
| 12 | 54.315 | 58.417 | 25.692 | 360.426 |
| 13 | 47.801 | 151.945 | 121.041 | 178.063 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.38 | -0.417 | -0.109 | 0.565 |
| 02 | -0.845 | 0.052 | 0.002 | 0.415 |
| 03 | -0.947 | 0.515 | -0.261 | 0.156 |
| 04 | -1.868 | 1.169 | -1.656 | -0.833 |
| 05 | -3.245 | -2.529 | -4.398 | 1.353 |
| 06 | -4.398 | -1.836 | -3.177 | 1.331 |
| 07 | -3.424 | -4.398 | -2.935 | 1.361 |
| 08 | -2.22 | -0.308 | 1.067 | -1.392 |
| 09 | 1.253 | -3.027 | -2.58 | -0.985 |
| 10 | 0.271 | -2.864 | -2.201 | 0.925 |
| 11 | -1.588 | 0.582 | 0.563 | -1.385 |
| 12 | -0.815 | -0.745 | -1.534 | 1.053 |
| 13 | -0.939 | 0.195 | -0.03 | 0.352 |