Model info
| Transcription factor | TCF7L1 | ||||||||
| Model | TF7L1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 16 | ||||||||
| Quality | D | ||||||||
| Consensus | dddddhWhCSRGRvRv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 51 | ||||||||
| TF family | TCF-7-related factors{4.1.3} | ||||||||
| TF subfamily | TCF-7L1 (TCF-3) [1]{4.1.3.0.2} | ||||||||
| HGNC | 11640 | ||||||||
| EntrezGene | 83439 | ||||||||
| UniProt ID | TF7L1_HUMAN | ||||||||
| UniProt AC | Q9HCS4 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 21.25 | 6.25 | 8.25 | 15.25 |
| 02 | 11.0 | 5.0 | 18.0 | 17.0 |
| 03 | 18.75 | 1.75 | 22.75 | 7.75 |
| 04 | 15.75 | 5.75 | 11.75 | 17.75 |
| 05 | 17.0 | 5.0 | 15.0 | 14.0 |
| 06 | 24.0 | 14.0 | 5.0 | 8.0 |
| 07 | 27.0 | 1.0 | 8.0 | 15.0 |
| 08 | 13.0 | 8.0 | 4.0 | 26.0 |
| 09 | 4.0 | 43.0 | 4.0 | 0.0 |
| 10 | 2.0 | 15.0 | 31.0 | 3.0 |
| 11 | 9.0 | 0.0 | 37.0 | 5.0 |
| 12 | 0.0 | 0.0 | 48.0 | 3.0 |
| 13 | 6.25 | 1.25 | 39.25 | 4.25 |
| 14 | 13.25 | 23.25 | 11.25 | 3.25 |
| 15 | 9.5 | 5.5 | 31.5 | 4.5 |
| 16 | 10.75 | 16.75 | 20.75 | 2.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.482 | -0.641 | -0.397 | 0.167 |
| 02 | -0.136 | -0.831 | 0.324 | 0.27 |
| 03 | 0.362 | -1.614 | 0.547 | -0.453 |
| 04 | 0.198 | -0.713 | -0.076 | 0.31 |
| 05 | 0.27 | -0.831 | 0.152 | 0.087 |
| 06 | 0.598 | 0.087 | -0.831 | -0.424 |
| 07 | 0.712 | -1.935 | -0.424 | 0.152 |
| 08 | 0.018 | -0.424 | -1.014 | 0.675 |
| 09 | -1.014 | 1.164 | -1.014 | -2.637 |
| 10 | -1.527 | 0.152 | 0.845 | -1.238 |
| 11 | -0.319 | -2.637 | 1.017 | -0.831 |
| 12 | -2.637 | -2.637 | 1.272 | -1.238 |
| 13 | -0.641 | -1.816 | 1.075 | -0.965 |
| 14 | 0.036 | 0.568 | -0.116 | -1.177 |
| 15 | -0.27 | -0.751 | 0.861 | -0.918 |
| 16 | -0.157 | 0.256 | 0.459 | -1.303 |