Model info
| Transcription factor | TCF7 | ||||||||
| Model | TCF7_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Consensus | RSWWCAAAGSdb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 16 | ||||||||
| TF family | TCF-7-related factors{4.1.3} | ||||||||
| TF subfamily | TCF-7 (TCF-1) [1]{4.1.3.0.1} | ||||||||
| HGNC | 11639 | ||||||||
| EntrezGene | 6932 | ||||||||
| UniProt ID | TCF7_HUMAN | ||||||||
| UniProt AC | P36402 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 9.466 | 1.771 | 2.87 | 1.893 |
| 02 | 0.0 | 5.13 | 8.916 | 1.954 |
| 03 | 9.527 | 0.0 | 1.71 | 4.763 |
| 04 | 7.573 | 0.977 | 0.855 | 6.595 |
| 05 | 0.855 | 13.435 | 0.855 | 0.855 |
| 06 | 15.145 | 0.0 | 0.0 | 0.855 |
| 07 | 16.0 | 0.0 | 0.0 | 0.0 |
| 08 | 15.145 | 0.855 | 0.0 | 0.0 |
| 09 | 0.0 | 1.71 | 13.435 | 0.855 |
| 10 | 0.733 | 8.061 | 5.252 | 1.954 |
| 11 | 4.153 | 2.565 | 6.229 | 3.053 |
| 12 | 2.29 | 6.076 | 3.389 | 4.244 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.772 | -0.644 | -0.275 | -0.596 |
| 02 | -1.913 | 0.216 | 0.717 | -0.573 |
| 03 | 0.778 | -1.913 | -0.669 | 0.151 |
| 04 | 0.566 | -1.033 | -1.109 | 0.44 |
| 05 | -1.109 | 1.102 | -1.109 | -1.109 |
| 06 | 1.216 | -1.913 | -1.913 | -1.109 |
| 07 | 1.269 | -1.913 | -1.913 | -1.913 |
| 08 | 1.216 | -1.109 | -1.913 | -1.913 |
| 09 | -1.913 | -0.669 | 1.102 | -1.109 |
| 10 | -1.191 | 0.623 | 0.236 | -0.573 |
| 11 | 0.032 | -0.365 | 0.389 | -0.225 |
| 12 | -0.453 | 0.366 | -0.139 | 0.051 |