Model info
| Transcription factor | ZNF652 | ||||||||
| Model | ZN652_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | nRdKGGTTAAh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 236 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | ZNF652-like factors{2.3.3.29} | ||||||||
| HGNC | 29147 | ||||||||
| EntrezGene | 22834 | ||||||||
| UniProt ID | ZN652_HUMAN | ||||||||
| UniProt AC | Q9Y2D9 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 140.5 | 23.5 | 35.5 | 35.5 |
| 02 | 173.0 | 16.0 | 24.0 | 22.0 |
| 03 | 118.5 | 19.5 | 69.5 | 27.5 |
| 04 | 12.75 | 11.75 | 187.75 | 22.75 |
| 05 | 24.0 | 0.0 | 204.0 | 7.0 |
| 06 | 6.0 | 2.0 | 221.0 | 6.0 |
| 07 | 5.0 | 8.0 | 5.0 | 217.0 |
| 08 | 11.25 | 4.25 | 10.25 | 209.25 |
| 09 | 213.25 | 5.25 | 7.25 | 9.25 |
| 10 | 204.75 | 9.75 | 9.75 | 10.75 |
| 11 | 61.0 | 44.0 | 29.0 | 101.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.859 | -0.883 | -0.489 | -0.489 |
| 02 | 1.065 | -1.242 | -0.863 | -0.945 |
| 03 | 0.69 | -1.058 | 0.165 | -0.734 |
| 04 | -1.449 | -1.523 | 1.146 | -0.913 |
| 05 | -0.863 | -3.785 | 1.229 | -1.972 |
| 06 | -2.1 | -2.883 | 1.308 | -2.1 |
| 07 | -2.245 | -1.859 | -2.245 | 1.29 |
| 08 | -1.561 | -2.371 | -1.644 | 1.254 |
| 09 | 1.273 | -2.207 | -1.943 | -1.734 |
| 10 | 1.232 | -1.688 | -1.688 | -1.602 |
| 11 | 0.037 | -0.282 | -0.683 | 0.532 |