Model info
| Transcription factor | ZNF589 | ||||||||
| Model | ZN589_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 16 | ||||||||
| Quality | D | ||||||||
| Consensus | nMMRSKGKTWYWRYSb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 15 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | unclassified{2.3.3.0} | ||||||||
| HGNC | 16747 | ||||||||
| EntrezGene | 51385 | ||||||||
| UniProt ID | ZN589_HUMAN | ||||||||
| UniProt AC | Q86UQ0 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.568 | 7.295 | 2.568 | 2.568 |
| 02 | 3.801 | 9.247 | 1.952 | 0.0 |
| 03 | 5.651 | 7.5 | 1.849 | 0.0 |
| 04 | 9.452 | 0.925 | 2.774 | 1.849 |
| 05 | 2.774 | 6.575 | 5.651 | 0.0 |
| 06 | 0.0 | 1.849 | 10.377 | 2.774 |
| 07 | 0.0 | 0.925 | 12.123 | 1.952 |
| 08 | 0.0 | 2.877 | 4.726 | 7.397 |
| 09 | 6.473 | 0.0 | 0.0 | 8.527 |
| 10 | 7.397 | 0.0 | 1.952 | 5.651 |
| 11 | 1.849 | 7.397 | 0.0 | 5.753 |
| 12 | 5.548 | 2.774 | 0.0 | 6.678 |
| 13 | 4.726 | 2.774 | 7.5 | 0.0 |
| 14 | 0.0 | 9.349 | 1.849 | 3.801 |
| 15 | 1.849 | 9.349 | 2.877 | 0.925 |
| 16 | 1.618 | 4.598 | 6.241 | 2.543 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.31 | 0.588 | -0.31 | -0.31 |
| 02 | 0.012 | 0.807 | -0.521 | -1.878 |
| 03 | 0.357 | 0.614 | -0.561 | -1.878 |
| 04 | 0.828 | -1.017 | -0.249 | -0.561 |
| 05 | -0.249 | 0.494 | 0.357 | -1.878 |
| 06 | -1.878 | -0.561 | 0.915 | -0.249 |
| 07 | -1.878 | -1.017 | 1.062 | -0.521 |
| 08 | -1.878 | -0.22 | 0.199 | 0.601 |
| 09 | 0.479 | -1.878 | -1.878 | 0.732 |
| 10 | 0.601 | -1.878 | -0.521 | 0.357 |
| 11 | -0.561 | 0.601 | -1.878 | 0.373 |
| 12 | 0.341 | -0.249 | -1.878 | 0.508 |
| 13 | 0.199 | -0.249 | 0.614 | -1.878 |
| 14 | -1.878 | 0.817 | -0.561 | 0.012 |
| 15 | -0.561 | 0.817 | -0.22 | -1.017 |
| 16 | -0.657 | 0.175 | 0.446 | -0.318 |