Model info
| Transcription factor | ZNF282 | ||||||||
| Model | ZN282_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | nRKRTnAKGSGARW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 36 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | ZNF282-like factors{2.3.3.38} | ||||||||
| HGNC | 13076 | ||||||||
| EntrezGene | 8427 | ||||||||
| UniProt ID | ZN282_HUMAN | ||||||||
| UniProt AC | Q9UDV7 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 10.5 | 14.5 | 5.5 | 5.5 |
| 02 | 7.75 | 0.75 | 25.75 | 1.75 |
| 03 | 4.5 | 0.5 | 14.5 | 16.5 |
| 04 | 15.0 | 0.0 | 18.0 | 3.0 |
| 05 | 2.0 | 0.0 | 4.0 | 30.0 |
| 06 | 5.0 | 5.0 | 6.0 | 20.0 |
| 07 | 21.0 | 0.0 | 15.0 | 0.0 |
| 08 | 3.0 | 1.0 | 6.0 | 26.0 |
| 09 | 4.0 | 0.0 | 31.0 | 1.0 |
| 10 | 2.0 | 9.0 | 24.0 | 1.0 |
| 11 | 10.0 | 0.0 | 25.0 | 1.0 |
| 12 | 32.25 | 0.25 | 1.25 | 2.25 |
| 13 | 20.5 | 3.5 | 11.5 | 0.5 |
| 14 | 22.75 | 1.75 | 4.75 | 6.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.141 | 0.442 | -0.436 | -0.436 |
| 02 | -0.135 | -1.794 | 0.991 | -1.319 |
| 03 | -0.606 | -1.959 | 0.442 | 0.564 |
| 04 | 0.474 | -2.402 | 0.647 | -0.932 |
| 05 | -1.229 | -2.402 | -0.704 | 1.139 |
| 06 | -0.518 | -0.518 | -0.361 | 0.747 |
| 07 | 0.794 | -2.402 | 0.474 | -2.402 |
| 08 | -0.932 | -1.652 | -0.361 | 1.0 |
| 09 | -0.704 | -2.402 | 1.17 | -1.652 |
| 10 | -1.229 | 0.0 | 0.923 | -1.652 |
| 11 | 0.096 | -2.402 | 0.962 | -1.652 |
| 12 | 1.209 | -2.156 | -1.529 | -1.146 |
| 13 | 0.771 | -0.811 | 0.225 | -1.959 |
| 14 | 0.871 | -1.319 | -0.561 | -0.258 |