Model info
| Transcription factor | ZNF232 | ||||||||
| Model | ZN232_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 19 | ||||||||
| Quality | D | ||||||||
| Consensus | nGTTAAAYGTAGATTAARh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 50 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | ZNF24-like factors{2.3.3.10} | ||||||||
| HGNC | 13026 | ||||||||
| EntrezGene | 7775 | ||||||||
| UniProt ID | ZN232_HUMAN | ||||||||
| UniProt AC | Q9UNY5 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.75 | 8.75 | 7.75 | 25.75 |
| 02 | 2.0 | 2.0 | 44.0 | 2.0 |
| 03 | 2.0 | 4.0 | 2.0 | 42.0 |
| 04 | 2.0 | 7.0 | 0.0 | 41.0 |
| 05 | 49.0 | 1.0 | 0.0 | 0.0 |
| 06 | 48.0 | 0.0 | 1.0 | 1.0 |
| 07 | 45.0 | 3.0 | 0.0 | 2.0 |
| 08 | 5.0 | 21.0 | 1.0 | 23.0 |
| 09 | 2.0 | 0.0 | 48.0 | 0.0 |
| 10 | 0.0 | 0.0 | 0.0 | 50.0 |
| 11 | 42.0 | 0.0 | 5.0 | 3.0 |
| 12 | 1.0 | 0.0 | 49.0 | 0.0 |
| 13 | 50.0 | 0.0 | 0.0 | 0.0 |
| 14 | 0.0 | 4.0 | 0.0 | 46.0 |
| 15 | 0.0 | 2.0 | 2.0 | 46.0 |
| 16 | 48.0 | 1.0 | 0.0 | 1.0 |
| 17 | 44.75 | 1.75 | 1.75 | 1.75 |
| 18 | 7.5 | 5.5 | 34.5 | 2.5 |
| 19 | 9.75 | 12.75 | 7.75 | 19.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.435 | -0.326 | -0.435 | 0.685 |
| 02 | -1.51 | -1.51 | 1.205 | -1.51 |
| 03 | -1.51 | -0.996 | -1.51 | 1.16 |
| 04 | -1.51 | -0.524 | -2.623 | 1.136 |
| 05 | 1.311 | -1.919 | -2.623 | -2.623 |
| 06 | 1.29 | -2.623 | -1.919 | -1.919 |
| 07 | 1.227 | -1.22 | -2.623 | -1.51 |
| 08 | -0.813 | 0.489 | -1.919 | 0.576 |
| 09 | -1.51 | -2.623 | 1.29 | -2.623 |
| 10 | -2.623 | -2.623 | -2.623 | 1.33 |
| 11 | 1.16 | -2.623 | -0.813 | -1.22 |
| 12 | -1.919 | -2.623 | 1.311 | -2.623 |
| 13 | 1.33 | -2.623 | -2.623 | -2.623 |
| 14 | -2.623 | -0.996 | -2.623 | 1.249 |
| 15 | -2.623 | -1.51 | -1.51 | 1.249 |
| 16 | 1.29 | -1.919 | -2.623 | -1.919 |
| 17 | 1.222 | -1.597 | -1.597 | -1.597 |
| 18 | -0.464 | -0.733 | 0.968 | -1.355 |
| 19 | -0.228 | 0.018 | -0.435 | 0.43 |