Model info
| Transcription factor | ZNF143 | ||||||||
| Model | ZN143_HUMAN.H10DI.A | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 22 | ||||||||
| Quality | A | ||||||||
| Consensus | nnnYRRTGCATKvTGGGWvddn | ||||||||
| wAUC | 0.9400648501766599 | ||||||||
| Best AUC | 0.9687744078115291 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 103 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | ZNF76-like factors{2.3.3.28} | ||||||||
| HGNC | 12928 | ||||||||
| EntrezGene | 7702 | ||||||||
| UniProt ID | ZN143_HUMAN | ||||||||
| UniProt AC | P52747 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 5.063 | 11.313 | 3.813 | 4.063 | 4.063 | 13.313 | 3.813 | 5.063 | 4.063 | 17.313 | 3.813 | 4.063 | 4.063 | 11.313 | 3.813 | 4.063 |
| 02 | 3.75 | 3.75 | 6.0 | 3.75 | 4.75 | 3.75 | 41.0 | 3.75 | 3.75 | 3.75 | 4.0 | 3.75 | 3.75 | 3.75 | 6.0 | 3.75 |
| 03 | 1.625 | 11.375 | 0.625 | 2.375 | 1.625 | 11.375 | 0.625 | 1.375 | 3.625 | 45.375 | 0.625 | 7.375 | 1.625 | 11.375 | 0.625 | 1.375 |
| 04 | 4.813 | 0.313 | 3.313 | 0.063 | 41.813 | 0.313 | 32.313 | 5.063 | 0.813 | 0.313 | 1.313 | 0.063 | 2.813 | 0.313 | 9.313 | 0.063 |
| 05 | 25.063 | 2.063 | 14.063 | 9.063 | 0.063 | 0.063 | 1.063 | 0.063 | 5.063 | 0.063 | 33.063 | 8.063 | 2.063 | 0.063 | 2.063 | 1.063 |
| 06 | 5.063 | 0.063 | 5.063 | 22.063 | 0.063 | 0.063 | 0.063 | 2.063 | 0.063 | 0.063 | 7.063 | 43.063 | 2.063 | 0.063 | 1.063 | 15.063 |
| 07 | 0.0 | 0.0 | 7.25 | 0.0 | 0.0 | 0.0 | 0.25 | 0.0 | 0.0 | 0.0 | 13.25 | 0.0 | 0.0 | 0.0 | 82.25 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 87.0 | 13.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 09 | 1.0 | 0.0 | 0.0 | 0.0 | 86.0 | 0.0 | 0.0 | 1.0 | 8.0 | 1.0 | 3.0 | 1.0 | 2.0 | 0.0 | 0.0 | 0.0 |
| 10 | 0.0 | 6.0 | 0.0 | 91.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 2.0 | 1.0 | 0.0 | 0.0 | 0.0 | 2.0 |
| 11 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 2.0 | 2.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 | 10.0 | 17.0 | 68.0 |
| 12 | 0.0 | 0.0 | 0.0 | 0.0 | 10.0 | 1.0 | 0.0 | 1.0 | 4.0 | 11.0 | 4.0 | 1.0 | 18.0 | 8.0 | 45.0 | 0.0 |
| 13 | 0.0 | 4.0 | 0.0 | 28.0 | 0.0 | 2.0 | 0.0 | 18.0 | 0.0 | 0.0 | 0.0 | 49.0 | 0.0 | 1.0 | 0.0 | 1.0 |
| 14 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 7.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 96.0 | 0.0 |
| 15 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 103.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 100.0 | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 17 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 44.0 | 2.0 | 0.0 | 54.0 | 1.0 | 1.0 | 0.0 | 1.0 |
| 18 | 15.25 | 7.25 | 14.25 | 8.25 | 1.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 39.5 | 5.5 | 8.5 | 1.5 |
| 19 | 27.938 | 5.938 | 11.938 | 9.938 | 3.438 | 3.438 | 3.438 | 4.438 | 6.938 | 1.938 | 6.938 | 6.938 | 5.188 | 0.188 | 1.188 | 3.188 |
| 20 | 10.125 | 4.125 | 9.125 | 20.125 | 4.625 | 0.625 | 1.625 | 4.625 | 1.875 | 2.875 | 7.875 | 10.875 | 2.875 | 3.875 | 5.875 | 11.875 |
| 21 | 5.875 | 3.875 | 2.875 | 6.875 | 2.625 | 2.625 | 2.625 | 3.625 | 4.125 | 3.125 | 10.125 | 7.125 | 12.375 | 9.375 | 13.375 | 12.375 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.229 | 0.545 | -0.495 | -0.435 | -0.435 | 0.704 | -0.495 | -0.229 | -0.435 | 0.962 | -0.495 | -0.435 | -0.435 | 0.545 | -0.495 | -0.435 |
| 02 | -0.51 | -0.51 | -0.067 | -0.51 | -0.289 | -0.51 | 1.814 | -0.51 | -0.51 | -0.51 | -0.45 | -0.51 | -0.51 | -0.51 | -0.067 | -0.51 |
| 03 | -1.257 | 0.55 | -1.995 | -0.926 | -1.257 | 0.55 | -1.995 | -1.397 | -0.541 | 1.915 | -1.995 | 0.13 | -1.257 | 0.55 | -1.995 | -1.397 |
| 04 | -0.276 | -2.413 | -0.625 | -2.95 | 1.834 | -2.413 | 1.578 | -0.229 | -1.809 | -2.413 | -1.435 | -2.95 | -0.774 | -2.413 | 0.356 | -2.95 |
| 05 | 1.327 | -1.051 | 0.758 | 0.329 | -2.95 | -2.95 | -1.604 | -2.95 | -0.229 | -2.95 | 1.601 | 0.216 | -1.051 | -2.95 | -1.051 | -1.604 |
| 06 | -0.229 | -2.95 | -0.229 | 1.201 | -2.95 | -2.95 | -2.95 | -1.051 | -2.95 | -2.95 | 0.089 | 1.863 | -1.051 | -2.95 | -1.604 | 0.825 |
| 07 | -3.145 | -3.145 | 0.114 | -3.145 | -3.145 | -3.145 | -2.523 | -3.145 | -3.145 | -3.145 | 0.699 | -3.145 | -3.145 | -3.145 | 2.507 | -3.145 |
| 08 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -1.652 | 2.563 | 0.681 | -1.078 | -3.145 | -3.145 | -3.145 | -3.145 |
| 09 | -1.652 | -3.145 | -3.145 | -3.145 | 2.552 | -3.145 | -3.145 | -1.652 | 0.209 | -1.652 | -0.715 | -1.652 | -1.078 | -3.145 | -3.145 | -3.145 |
| 10 | -3.145 | -0.067 | -3.145 | 2.608 | -3.145 | -3.145 | -3.145 | -1.652 | -3.145 | -3.145 | -1.078 | -1.652 | -3.145 | -3.145 | -3.145 | -1.078 |
| 11 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -1.078 | -1.078 | -1.078 | -3.145 | -3.145 | -1.652 | -1.652 | -3.145 | 0.425 | 0.944 | 2.318 |
| 12 | -3.145 | -3.145 | -3.145 | -3.145 | 0.425 | -1.652 | -3.145 | -1.652 | -0.45 | 0.518 | -0.45 | -1.652 | 1.0 | 0.209 | 1.907 | -3.145 |
| 13 | -3.145 | -0.45 | -3.145 | 1.436 | -3.145 | -1.078 | -3.145 | 1.0 | -3.145 | -3.145 | -3.145 | 1.992 | -3.145 | -1.652 | -3.145 | -1.652 |
| 14 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | 0.08 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | 2.661 | -3.145 |
| 15 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | 2.731 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 |
| 16 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | 2.702 | -0.715 | -3.145 | -3.145 | -3.145 | -3.145 |
| 17 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | 1.885 | -1.078 | -3.145 | 2.088 | -1.652 | -1.652 | -3.145 | -1.652 |
| 18 | 0.837 | 0.114 | 0.771 | 0.239 | -1.652 | -1.078 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | -3.145 | 1.777 | -0.15 | 0.267 | -1.324 |
| 19 | 1.434 | -0.077 | 0.598 | 0.419 | -0.591 | -0.591 | -0.591 | -0.353 | 0.072 | -1.105 | 0.072 | 0.072 | -0.206 | -2.646 | -1.516 | -0.66 |
| 20 | 0.437 | -0.421 | 0.336 | 1.11 | -0.314 | -1.995 | -1.257 | -0.314 | -1.134 | -0.754 | 0.194 | 0.507 | -0.754 | -0.48 | -0.087 | 0.592 |
| 21 | -0.087 | -0.48 | -0.754 | 0.063 | -0.836 | -0.836 | -0.836 | -0.541 | -0.421 | -0.678 | 0.437 | 0.097 | 0.633 | 0.362 | 0.709 | 0.633 |