Model info
| Transcription factor | ZKSCAN1 | ||||||||
| Model | ZKSC1_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 22 | ||||||||
| Quality | C | ||||||||
| Consensus | bbbdGCRCMYAGTAGGbvYbYh | ||||||||
| wAUC | 0.8835149112126456 | ||||||||
| Best AUC | 0.8835149112126456 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 499 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | ZNF24-like factors{2.3.3.10} | ||||||||
| HGNC | 13101 | ||||||||
| EntrezGene | 7586 | ||||||||
| UniProt ID | ZKSC1_HUMAN | ||||||||
| UniProt AC | P17029 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 58.474 | 275.543 | 106.512 | 58.717 |
| 02 | 44.68 | 284.233 | 79.118 | 91.214 |
| 03 | 75.239 | 129.281 | 87.112 | 207.613 |
| 04 | 114.213 | 63.777 | 234.895 | 86.36 |
| 05 | 43.01 | 18.191 | 404.404 | 33.64 |
| 06 | 25.175 | 435.447 | 17.154 | 21.47 |
| 07 | 354.744 | 23.342 | 108.172 | 12.988 |
| 08 | 3.312 | 482.777 | 11.935 | 1.222 |
| 09 | 376.942 | 44.964 | 35.661 | 41.678 |
| 10 | 6.827 | 252.682 | 35.493 | 204.243 |
| 11 | 448.242 | 18.585 | 16.113 | 16.305 |
| 12 | 1.672 | 23.855 | 470.982 | 2.736 |
| 13 | 8.985 | 30.16 | 25.115 | 434.984 |
| 14 | 396.125 | 28.028 | 72.057 | 3.035 |
| 15 | 37.513 | 2.466 | 446.189 | 13.078 |
| 16 | 9.937 | 18.091 | 463.734 | 7.484 |
| 17 | 44.56 | 120.774 | 79.159 | 254.753 |
| 18 | 69.756 | 153.102 | 238.524 | 37.864 |
| 19 | 35.558 | 315.195 | 52.944 | 95.548 |
| 20 | 60.142 | 66.883 | 82.853 | 289.367 |
| 21 | 40.194 | 296.281 | 52.681 | 110.089 |
| 22 | 257.722 | 83.216 | 67.212 | 91.096 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.744 | 0.785 | -0.156 | -0.74 |
| 02 | -1.005 | 0.816 | -0.449 | -0.309 |
| 03 | -0.498 | 0.035 | -0.354 | 0.504 |
| 04 | -0.088 | -0.66 | 0.627 | -0.363 |
| 05 | -1.042 | -1.856 | 1.167 | -1.278 |
| 06 | -1.553 | 1.241 | -1.91 | -1.703 |
| 07 | 1.037 | -1.625 | -0.141 | -2.162 |
| 08 | -3.257 | 1.344 | -2.237 | -3.819 |
| 09 | 1.097 | -0.999 | -1.222 | -1.073 |
| 10 | -2.713 | 0.699 | -1.227 | 0.488 |
| 11 | 1.27 | -1.837 | -1.968 | -1.957 |
| 12 | -3.668 | -1.604 | 1.319 | -3.383 |
| 13 | -2.484 | -1.382 | -1.556 | 1.24 |
| 14 | 1.146 | -1.452 | -0.54 | -3.316 |
| 15 | -1.174 | -3.448 | 1.265 | -2.156 |
| 16 | -2.398 | -1.861 | 1.303 | -2.638 |
| 17 | -1.008 | -0.032 | -0.448 | 0.707 |
| 18 | -0.572 | 0.202 | 0.642 | -1.165 |
| 19 | -1.225 | 0.919 | -0.841 | -0.263 |
| 20 | -0.717 | -0.613 | -0.404 | 0.834 |
| 21 | -1.108 | 0.857 | -0.846 | -0.124 |
| 22 | 0.719 | -0.399 | -0.608 | -0.31 |