Model info
| Transcription factor | Zic3 | ||||||||
| Model | ZIC3_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | C | ||||||||
| Consensus | bGGGKRvYb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 33 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | GLI-like factors{2.3.3.1} | ||||||||
| MGI | 106676 | ||||||||
| EntrezGene | 22773 | ||||||||
| UniProt ID | ZIC3_MOUSE | ||||||||
| UniProt AC | Q62521 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.25 | 10.25 | 7.25 | 13.25 |
| 02 | 4.0 | 0.0 | 29.0 | 0.0 |
| 03 | 0.0 | 1.0 | 29.0 | 3.0 |
| 04 | 1.0 | 1.0 | 28.0 | 3.0 |
| 05 | 6.0 | 0.0 | 7.0 | 20.0 |
| 06 | 5.0 | 4.0 | 23.0 | 1.0 |
| 07 | 5.0 | 5.0 | 20.0 | 3.0 |
| 08 | 2.0 | 11.0 | 0.0 | 20.0 |
| 09 | 3.0 | 17.0 | 6.0 | 7.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.072 | 0.198 | -0.116 | 0.437 |
| 02 | -0.627 | -2.345 | 1.186 | -2.345 |
| 03 | -2.345 | -1.583 | 1.186 | -0.857 |
| 04 | -1.583 | -1.583 | 1.152 | -0.857 |
| 05 | -0.283 | -2.345 | -0.147 | 0.828 |
| 06 | -0.44 | -0.627 | 0.962 | -1.583 |
| 07 | -0.44 | -0.44 | 0.828 | -0.857 |
| 08 | -1.155 | 0.263 | -2.345 | 0.828 |
| 09 | -0.857 | 0.672 | -0.283 | -0.147 |