Transcription factor | Hivep1 | ||||||||
Model | ZEP1_MOUSE.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 12 | ||||||||
Quality | D | ||||||||
Consensus | KGGGAAATCCCn | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 10 | ||||||||
TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
TF subfamily | HIV EP-factors{2.3.4.5} | ||||||||
MGI | 96100 | ||||||||
EntrezGene | |||||||||
UniProt ID | ZEP1_MOUSE | ||||||||
UniProt AC | Q03172 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 0.599 | 1.303 | 2.007 | 6.092 |
02 | 0.0 | 0.0 | 10.0 | 0.0 |
03 | 2.676 | 0.0 | 7.324 | 0.0 |
04 | 2.817 | 0.0 | 7.183 | 0.0 |
05 | 7.183 | 0.0 | 2.817 | 0.0 |
06 | 10.0 | 0.0 | 0.0 | 0.0 |
07 | 7.183 | 0.0 | 2.817 | 0.0 |
08 | 1.268 | 0.0 | 0.0 | 8.732 |
09 | 0.0 | 8.028 | 1.268 | 0.704 |
10 | 0.0 | 10.0 | 0.0 | 0.0 |
11 | 0.0 | 8.592 | 0.0 | 1.408 |
12 | 0.951 | 4.331 | 2.359 | 2.359 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.963 | -0.493 | -0.175 | 0.774 |
02 | -1.676 | -1.676 | 1.235 | -1.676 |
03 | 0.056 | -1.676 | 0.943 | -1.676 |
04 | 0.098 | -1.676 | 0.925 | -1.676 |
05 | 0.925 | -1.676 | 0.098 | -1.676 |
06 | 1.235 | -1.676 | -1.676 | -1.676 |
07 | 0.925 | -1.676 | 0.098 | -1.676 |
08 | -0.512 | -1.676 | -1.676 | 1.107 |
09 | -1.676 | 1.029 | -0.512 | -0.877 |
10 | -1.676 | 1.235 | -1.676 | -1.676 |
11 | -1.676 | 1.092 | -1.676 | -0.438 |
12 | -0.701 | 0.467 | -0.047 | -0.047 |