Model info
| Transcription factor | ZEB1 | ||||||||
| Model | ZEB1_HUMAN.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Consensus | nvCAGGTRdvn | ||||||||
| wAUC | 0.8040945479533839 | ||||||||
| Best AUC | 0.8781919391872091 | ||||||||
| Benchmark datasets | 3 | ||||||||
| Aligned words | 506 | ||||||||
| TF family | HD-ZF factors{3.1.8} | ||||||||
| TF subfamily | ZEB{3.1.8.3} | ||||||||
| HGNC | 11642 | ||||||||
| EntrezGene | 6935 | ||||||||
| UniProt ID | ZEB1_HUMAN | ||||||||
| UniProt AC | P37275 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 109.835 | 116.708 | 114.581 | 157.864 |
| 02 | 170.153 | 176.529 | 132.0 | 20.306 |
| 03 | 21.395 | 472.698 | 3.821 | 1.075 |
| 04 | 492.587 | 2.067 | 1.716 | 2.618 |
| 05 | 14.873 | 0.0 | 481.393 | 2.721 |
| 06 | 1.128 | 2.719 | 491.169 | 3.971 |
| 07 | 54.144 | 1.853 | 10.474 | 432.517 |
| 08 | 168.954 | 4.817 | 317.974 | 7.243 |
| 09 | 211.291 | 47.755 | 107.913 | 132.029 |
| 10 | 125.132 | 77.63 | 234.417 | 61.809 |
| 11 | 102.557 | 145.192 | 134.268 | 116.971 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.126 | -0.066 | -0.084 | 0.233 |
| 02 | 0.307 | 0.344 | 0.056 | -1.754 |
| 03 | -1.705 | 1.323 | -3.157 | -3.872 |
| 04 | 1.364 | -3.552 | -3.654 | -3.411 |
| 05 | -2.04 | -4.398 | 1.341 | -3.386 |
| 06 | -3.852 | -3.387 | 1.361 | -3.13 |
| 07 | -0.819 | -3.613 | -2.352 | 1.235 |
| 08 | 0.3 | -2.987 | 0.928 | -2.664 |
| 09 | 0.522 | -0.941 | -0.143 | 0.056 |
| 10 | 0.003 | -0.467 | 0.625 | -0.69 |
| 11 | -0.193 | 0.15 | 0.073 | -0.064 |