Model info
| Transcription factor | Zbtb18 | ||||||||
| Model | ZBT18_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | KCCAGATGTTbvSn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 18 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | ZNF238-like factors{2.3.3.16} | ||||||||
| MGI | 1353609 | ||||||||
| EntrezGene | 30928 | ||||||||
| UniProt ID | ZBT18_MOUSE | ||||||||
| UniProt AC | Q9WUK6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.75 | 0.75 | 4.75 | 11.75 |
| 02 | 4.0 | 14.0 | 0.0 | 0.0 |
| 03 | 0.0 | 18.0 | 0.0 | 0.0 |
| 04 | 18.0 | 0.0 | 0.0 | 0.0 |
| 05 | 0.0 | 0.0 | 18.0 | 0.0 |
| 06 | 17.0 | 1.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 0.0 | 18.0 |
| 08 | 0.0 | 0.0 | 18.0 | 0.0 |
| 09 | 0.0 | 2.0 | 0.0 | 16.0 |
| 10 | 0.0 | 0.0 | 4.0 | 14.0 |
| 11 | 1.0 | 5.0 | 4.0 | 8.0 |
| 12 | 4.0 | 8.0 | 5.0 | 1.0 |
| 13 | 2.0 | 7.0 | 8.0 | 1.0 |
| 14 | 2.75 | 6.75 | 6.75 | 1.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.266 | -1.266 | 0.047 | 0.871 |
| 02 | -0.101 | 1.036 | -1.978 | -1.978 |
| 03 | -1.978 | 1.277 | -1.978 | -1.978 |
| 04 | 1.277 | -1.978 | -1.978 | -1.978 |
| 05 | -1.978 | -1.978 | 1.277 | -1.978 |
| 06 | 1.222 | -1.109 | -1.978 | -1.978 |
| 07 | -1.978 | -1.978 | -1.978 | 1.277 |
| 08 | -1.978 | -1.978 | 1.277 | -1.978 |
| 09 | -1.978 | -0.651 | -1.978 | 1.164 |
| 10 | -1.978 | -1.978 | -0.101 | 1.036 |
| 11 | -1.109 | 0.091 | -0.101 | 0.513 |
| 12 | -0.101 | 0.513 | 0.091 | -1.109 |
| 13 | -0.651 | 0.391 | 0.513 | -1.109 |
| 14 | -0.408 | 0.358 | 0.358 | -0.748 |