Model info
Transcription factorYbx1
ModelYBOX1_MOUSE.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length11
Quality
D
ConsensusbSbSMTTSSYY
wAUC
Best AUC
Benchmark datasets
Aligned words63
TF familyDbp factors{9.1.1}
TF subfamilyB (DbpB/YB-1-like){9.1.1.2}
MGI99146
EntrezGene22608
UniProt IDYBOX1_MOUSE
UniProt ACP62960
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0022
0.0005 5.5662
0.0001 6.7482
PCM
ACGT
018.34411.70422.17619.656
023.80820.49632.764.816
035.67.72826.0422.512
046.7212.43241.721.008
0545.75210.082.0164.032
060.07.3360.054.544
070.03.0247.2851.576
080.020.83233.3767.672
090.89621.05633.3766.552
107.16844.1841.0089.52
115.0430.4082.91223.52
PWM
ACGT
01-0.565-0.2590.3410.226
02-1.2270.2660.717-1.037
03-0.912-0.6330.4950.355
04-0.756-0.2030.952-2.091
051.042-0.395-1.689-1.181
06-2.773-0.679-2.7731.214
07-2.773-1.403-0.6861.159
08-2.7730.2810.735-0.64
09-2.1470.2920.735-0.777
10-0.6991.008-2.091-0.447
11-1.00.645-1.4310.397