Model info
Transcription factorUSF2
ModelUSF2_HUMAN.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length19
Quality
A
ConsensusvvGTCACGTGvbvvbbvbb
wAUC
0.9733880947588758
Best AUC
0.9811969599299568
Benchmark datasets5
Aligned words501
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyUSF factors{1.2.6.2}
HGNC12594
EntrezGene7392
UniProt IDUSF2_HUMAN
UniProt ACQ15853
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.4941
0.0005 3.7991
0.0001 6.4611
PCM
ACGT
01108.075103.762223.73864.424
02102.14869.523273.06755.262
0357.8568.053432.471.621
047.35223.97118.436450.241
050.864499.1360.00.0
06496.3770.01.7551.868
070.0462.8210.81426.366
0850.9560.0449.0440.0
091.6763.8031.947492.574
100.8970.0497.9021.201
11168.82484.127197.8149.239
1229.19224.309133.239113.263
1359.507232.792166.94940.751
14125.847148.962165.18960.002
1564.042185.309182.62968.021
1663.012164.861192.34679.78
1780.906163.005194.24761.842
1863.555189.516156.60490.325
1961.123137.251192.58109.047
PWM
ACGT
01-0.144-0.1840.577-0.651
02-0.199-0.5770.775-0.801
03-0.756-2.5781.232-3.686
04-2.654-1.601-1.8451.273
05-3.9581.375-4.4-4.4
061.37-4.4-3.644-3.61
07-4.41.3-2.326-1.511
08-0.88-4.41.27-4.4
09-3.668-3.162-3.5881.362
10-3.944-4.41.373-3.827
110.297-0.390.454-0.913
12-1.4150.5790.063-0.097
13-0.7290.6160.286-1.096
140.0070.1730.276-0.721
15-0.6570.390.375-0.598
16-0.6730.2740.427-0.442
17-0.4280.2630.436-0.691
18-0.6650.4120.223-0.32
19-0.7030.0920.428-0.135