Model info
Transcription factorYY1
ModelTYY1_HUMAN.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length12
Quality
A
ConsensusvAAvATGGMbRM
wAUC
0.946869646899896
Best AUC
0.9673847777186358
Benchmark datasets20
Aligned words1852
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyYY1-like factors{2.3.3.9}
HGNC12856
EntrezGene7528
UniProt IDTYY1_HUMAN
UniProt ACP25490
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.5311
0.0005 4.7351
0.0001 7.0611
PCM
ACGT
01355.116872.914229.053142.436
021453.88839.40560.76745.459
031437.2359.07341.03862.179
04452.268264.446752.298130.507
051589.7155.1580.04.646
062.6830.00.8221596.014
071.7510.01597.7680.0
0845.5881.0211522.87230.039
09205.0111217.73820.432156.338
10162.034313.463934.291189.731
11215.165185.594998.427200.333
12217.4831043.986161.57176.481
PWM
ACGT
01-0.1180.778-0.554-1.024
021.287-2.276-1.859-2.139
031.276-1.886-2.237-1.837
040.123-0.4110.63-1.11
051.377-4.049-5.384-4.126
06-4.486-5.384-5.0151.381
07-4.716-5.3841.382-5.384
08-2.136-4.9431.334-2.534
09-0.6641.11-2.892-0.932
10-0.897-0.2420.846-0.74
11-0.616-0.7620.912-0.687
12-0.6050.957-0.899-0.812