Model info
| Transcription factor | YY1 | ||||||||
| Model | TYY1_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Consensus | vAAvATGGMbRM | ||||||||
| wAUC | 0.946869646899896 | ||||||||
| Best AUC | 0.9673847777186358 | ||||||||
| Benchmark datasets | 20 | ||||||||
| Aligned words | 1852 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | YY1-like factors{2.3.3.9} | ||||||||
| HGNC | 12856 | ||||||||
| EntrezGene | 7528 | ||||||||
| UniProt ID | TYY1_HUMAN | ||||||||
| UniProt AC | P25490 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 355.116 | 872.914 | 229.053 | 142.436 |
| 02 | 1453.888 | 39.405 | 60.767 | 45.459 |
| 03 | 1437.23 | 59.073 | 41.038 | 62.179 |
| 04 | 452.268 | 264.446 | 752.298 | 130.507 |
| 05 | 1589.715 | 5.158 | 0.0 | 4.646 |
| 06 | 2.683 | 0.0 | 0.822 | 1596.014 |
| 07 | 1.751 | 0.0 | 1597.768 | 0.0 |
| 08 | 45.588 | 1.021 | 1522.872 | 30.039 |
| 09 | 205.011 | 1217.738 | 20.432 | 156.338 |
| 10 | 162.034 | 313.463 | 934.291 | 189.731 |
| 11 | 215.165 | 185.594 | 998.427 | 200.333 |
| 12 | 217.483 | 1043.986 | 161.57 | 176.481 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.118 | 0.778 | -0.554 | -1.024 |
| 02 | 1.287 | -2.276 | -1.859 | -2.139 |
| 03 | 1.276 | -1.886 | -2.237 | -1.837 |
| 04 | 0.123 | -0.411 | 0.63 | -1.11 |
| 05 | 1.377 | -4.049 | -5.384 | -4.126 |
| 06 | -4.486 | -5.384 | -5.015 | 1.381 |
| 07 | -4.716 | -5.384 | 1.382 | -5.384 |
| 08 | -2.136 | -4.943 | 1.334 | -2.534 |
| 09 | -0.664 | 1.11 | -2.892 | -0.932 |
| 10 | -0.897 | -0.242 | 0.846 | -0.74 |
| 11 | -0.616 | -0.762 | 0.912 | -0.687 |
| 12 | -0.605 | 0.957 | -0.899 | -0.812 |