Transcription factor | Tlx1 | ||||||||
Model | TLX1_MOUSE.H10MO.S | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 11 | ||||||||
Quality | S | ||||||||
Consensus | bGSYAAKddGb | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 51 | ||||||||
TF family | NK-related factors{3.1.2} | ||||||||
TF subfamily | TLX{3.1.2.21} | ||||||||
MGI | 98769 | ||||||||
EntrezGene | |||||||||
UniProt ID | TLX1_MOUSE | ||||||||
UniProt AC | P43345 | ||||||||
Comment | Secondary motif. | ||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 5.451 | 19.026 | 8.786 | 17.736 |
02 | 0.811 | 5.678 | 42.077 | 2.434 |
03 | 0.0 | 21.59 | 17.152 | 12.258 |
04 | 0.0 | 28.197 | 2.434 | 20.37 |
05 | 47.755 | 1.622 | 0.811 | 0.811 |
06 | 43.533 | 4.437 | 1.407 | 1.622 |
07 | 0.0 | 9.9 | 22.186 | 18.914 |
08 | 16.126 | 0.811 | 22.831 | 11.232 |
09 | 23.642 | 3.03 | 8.798 | 15.53 |
10 | 1.622 | 0.0 | 38.07 | 11.308 |
11 | 6.275 | 24.495 | 12.549 | 7.682 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.758 | 0.376 | -0.341 | 0.31 |
02 | -2.035 | -0.723 | 1.143 | -1.391 |
03 | -2.637 | 0.497 | 0.278 | -0.036 |
04 | -2.637 | 0.754 | -1.391 | 0.441 |
05 | 1.267 | -1.662 | -2.035 | -2.035 |
06 | 1.176 | -0.93 | -1.748 | -1.662 |
07 | -2.637 | -0.233 | 0.523 | 0.371 |
08 | 0.22 | -2.035 | 0.55 | -0.117 |
09 | 0.584 | -1.23 | -0.339 | 0.184 |
10 | -1.662 | -2.637 | 1.045 | -0.111 |
11 | -0.638 | 0.618 | -0.015 | -0.461 |