Transcription factor | THAP1 | ||||||||
Model | THAP1_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | ChIP-Seq | ||||||||
Model length | 22 | ||||||||
Quality | D | ||||||||
Consensus | vSSvKCCMYbKYbvnbbhKGSY | ||||||||
wAUC | 0.6860545888285666 | ||||||||
Best AUC | 0.6860545888285666 | ||||||||
Benchmark datasets | 1 | ||||||||
Aligned words | 498 | ||||||||
TF family | THAP-related factors{2.9.1} | ||||||||
TF subfamily | THAP1{2.9.1.0.1} | ||||||||
HGNC | 20856 | ||||||||
EntrezGene | 55145 | ||||||||
UniProt ID | THAP1_HUMAN | ||||||||
UniProt AC | Q9NVV9 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 69.049 | 222.412 | 161.478 | 45.388 |
02 | 30.622 | 69.562 | 369.77 | 28.372 |
03 | 30.79 | 336.434 | 93.047 | 38.055 |
04 | 75.428 | 290.838 | 88.844 | 43.217 |
05 | 33.156 | 39.6 | 366.812 | 58.758 |
06 | 8.242 | 455.999 | 27.267 | 6.817 |
07 | 17.817 | 452.859 | 20.52 | 7.13 |
08 | 298.524 | 90.762 | 69.959 | 39.082 |
09 | 9.318 | 113.149 | 88.216 | 287.642 |
10 | 29.513 | 262.173 | 149.732 | 56.908 |
11 | 19.664 | 90.988 | 104.095 | 283.578 |
12 | 12.449 | 179.981 | 24.611 | 281.285 |
13 | 51.418 | 92.768 | 251.069 | 103.071 |
14 | 80.751 | 117.903 | 264.936 | 34.737 |
15 | 91.819 | 196.121 | 114.33 | 96.057 |
16 | 56.407 | 122.832 | 87.614 | 231.473 |
17 | 59.185 | 169.619 | 170.883 | 98.639 |
18 | 87.446 | 249.123 | 55.831 | 105.926 |
19 | 11.401 | 64.292 | 341.197 | 81.436 |
20 | 12.369 | 74.138 | 394.011 | 17.808 |
21 | 9.055 | 96.948 | 371.033 | 21.29 |
22 | 35.936 | 392.301 | 33.586 | 36.504 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.58 | 0.574 | 0.257 | -0.988 |
02 | -1.366 | -0.573 | 1.08 | -1.439 |
03 | -1.361 | 0.986 | -0.288 | -1.158 |
04 | -0.494 | 0.841 | -0.333 | -1.036 |
05 | -1.29 | -1.12 | 1.072 | -0.738 |
06 | -2.555 | 1.289 | -1.476 | -2.713 |
07 | -1.874 | 1.282 | -1.743 | -2.676 |
08 | 0.867 | -0.312 | -0.567 | -1.133 |
09 | -2.451 | -0.095 | -0.34 | 0.83 |
10 | -1.401 | 0.738 | 0.182 | -0.769 |
11 | -1.783 | -0.31 | -0.177 | 0.816 |
12 | -2.198 | 0.364 | -1.573 | 0.808 |
13 | -0.868 | -0.291 | 0.695 | -0.187 |
14 | -0.427 | -0.054 | 0.748 | -1.246 |
15 | -0.301 | 0.449 | -0.085 | -0.256 |
16 | -0.778 | -0.014 | -0.347 | 0.614 |
17 | -0.731 | 0.305 | 0.313 | -0.23 |
18 | -0.349 | 0.687 | -0.788 | -0.16 |
19 | -2.276 | -0.65 | 1.0 | -0.419 |
20 | -2.204 | -0.511 | 1.143 | -1.874 |
21 | -2.476 | -0.247 | 1.083 | -1.709 |
22 | -1.213 | 1.139 | -1.278 | -1.198 |