Model info
| Transcription factor | Tgif1 | ||||||||
| Model | TGIF1_MOUSE.H10MO.S | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | S | ||||||||
| Consensus | nTGACAR | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 18 | ||||||||
| TF family | TALE-type homeo domain factors{3.1.4} | ||||||||
| TF subfamily | TGIF{3.1.4.6} | ||||||||
| MGI | 1194497 | ||||||||
| EntrezGene | 21815 | ||||||||
| UniProt ID | TGIF1_MOUSE | ||||||||
| UniProt AC | P70284 | ||||||||
| Comment | Secondary motif. | ||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3.208 | 4.195 | 4.305 | 4.305 |
| 02 | 0.0 | 0.0 | 0.0 | 16.013 |
| 03 | 0.0 | 1.097 | 14.916 | 0.0 |
| 04 | 16.013 | 0.0 | 0.0 | 0.0 |
| 05 | 0.0 | 16.013 | 0.0 | 0.0 |
| 06 | 16.013 | 0.0 | 0.0 | 0.0 |
| 07 | 3.208 | 2.221 | 9.35 | 1.234 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.185 | 0.04 | 0.062 | 0.062 |
| 02 | -1.913 | -1.913 | -1.913 | 1.269 |
| 03 | -1.913 | -0.965 | 1.201 | -1.913 |
| 04 | 1.269 | -1.913 | -1.913 | -1.913 |
| 05 | -1.913 | 1.269 | -1.913 | -1.913 |
| 06 | 1.269 | -1.913 | -1.913 | -1.913 |
| 07 | -0.185 | -0.477 | 0.76 | -0.891 |