Model info
Transcription factorTgif1
ModelTGIF1_MOUSE.H10MO.S
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length7
Quality
S
ConsensusnTGACAR
wAUC
Best AUC
Benchmark datasets
Aligned words18
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyTGIF{3.1.4.6}
MGI1194497
EntrezGene21815
UniProt IDTGIF1_MOUSE
UniProt ACP70284
CommentSecondary motif.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9627
0.0005 5.8684
0.0001 7.1021
PCM
ACGT
013.2084.1954.3054.305
020.00.00.016.013
030.01.09714.9160.0
0416.0130.00.00.0
050.016.0130.00.0
0616.0130.00.00.0
073.2082.2219.351.234
PWM
ACGT
01-0.1850.040.0620.062
02-1.913-1.913-1.9131.269
03-1.913-0.9651.201-1.913
041.269-1.913-1.913-1.913
05-1.9131.269-1.913-1.913
061.269-1.913-1.913-1.913
07-0.185-0.4770.76-0.891