Model info
| Transcription factor | Tcf3 | ||||||||
| Model | TFE2_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 20 | ||||||||
| Quality | A | ||||||||
| Consensus | bbvCASCTGYbbShbbbbbb | ||||||||
| wAUC | 0.8526179570043664 | ||||||||
| Best AUC | 0.8616653706548376 | ||||||||
| Benchmark datasets | 3 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | E2A-related factors{1.2.1} | ||||||||
| TF subfamily | E2A (TCF-3, ITF-1){1.2.1.0.1} | ||||||||
| MGI | 98510 | ||||||||
| EntrezGene | 21423 | ||||||||
| UniProt ID | TFE2_MOUSE | ||||||||
| UniProt AC | P15806 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 69.842 | 143.394 | 77.899 | 207.326 |
| 02 | 26.008 | 166.595 | 131.623 | 174.236 |
| 03 | 91.954 | 264.485 | 125.257 | 16.765 |
| 04 | 0.0 | 496.381 | 2.08 | 0.0 |
| 05 | 472.216 | 2.254 | 2.517 | 21.474 |
| 06 | 4.708 | 207.366 | 285.437 | 0.95 |
| 07 | 2.974 | 429.437 | 66.05 | 0.0 |
| 08 | 0.0 | 2.355 | 0.0 | 496.106 |
| 09 | 0.0 | 5.032 | 424.443 | 68.986 |
| 10 | 0.0 | 275.694 | 38.934 | 183.833 |
| 11 | 54.762 | 196.773 | 59.437 | 187.489 |
| 12 | 57.578 | 134.892 | 99.0 | 206.991 |
| 13 | 18.492 | 321.43 | 82.99 | 75.549 |
| 14 | 142.947 | 143.599 | 47.184 | 164.731 |
| 15 | 56.692 | 118.946 | 215.957 | 106.867 |
| 16 | 40.868 | 194.693 | 89.427 | 173.473 |
| 17 | 71.477 | 137.842 | 79.802 | 209.34 |
| 18 | 48.896 | 135.138 | 135.54 | 178.887 |
| 19 | 62.928 | 167.62 | 94.854 | 173.059 |
| 20 | 39.408 | 219.622 | 100.737 | 138.694 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.569 | 0.139 | -0.462 | 0.504 |
| 02 | -1.521 | 0.287 | 0.054 | 0.332 |
| 03 | -0.3 | 0.746 | 0.005 | -1.93 |
| 04 | -4.398 | 1.373 | -3.548 | -4.398 |
| 05 | 1.323 | -3.501 | -3.434 | -1.701 |
| 06 | -3.003 | 0.504 | 0.822 | -3.92 |
| 07 | -3.328 | 1.228 | -0.624 | -4.398 |
| 08 | -4.398 | -3.475 | -4.398 | 1.372 |
| 09 | -4.398 | -2.953 | 1.217 | -0.581 |
| 10 | -4.398 | 0.787 | -1.137 | 0.385 |
| 11 | -0.807 | 0.452 | -0.727 | 0.404 |
| 12 | -0.758 | 0.078 | -0.227 | 0.503 |
| 13 | -1.84 | 0.94 | -0.4 | -0.492 |
| 14 | 0.136 | 0.14 | -0.951 | 0.276 |
| 15 | -0.773 | -0.046 | 0.545 | -0.152 |
| 16 | -1.09 | 0.442 | -0.327 | 0.327 |
| 17 | -0.547 | 0.1 | -0.439 | 0.514 |
| 18 | -0.917 | 0.08 | 0.083 | 0.358 |
| 19 | -0.671 | 0.293 | -0.269 | 0.325 |
| 20 | -1.125 | 0.561 | -0.21 | 0.106 |