Model info
| Transcription factor | Tcf3 | ||||||||
| Model | TFE2_MOUSE.H10DI.A | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 23 | ||||||||
| Quality | A | ||||||||
| Consensus | ndSCAGSTGbbvbdSbRKvbdbb | ||||||||
| wAUC | 0.8599612631436858 | ||||||||
| Best AUC | 0.8709568721113843 | ||||||||
| Benchmark datasets | 3 | ||||||||
| Aligned words | 584 | ||||||||
| TF family | E2A-related factors{1.2.1} | ||||||||
| TF subfamily | E2A (TCF-3, ITF-1){1.2.1.0.1} | ||||||||
| MGI | 98510 | ||||||||
| EntrezGene | 21423 | ||||||||
| UniProt ID | TFE2_MOUSE | ||||||||
| UniProt AC | P15806 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 17.484 | 9.124 | 44.36 | 16.272 | 31.911 | 6.612 | 13.842 | 71.034 | 26.123 | 12.436 | 46.372 | 44.238 | 0.971 | 6.373 | 45.921 | 103.217 |
| 02 | 6.559 | 12.476 | 56.632 | 0.823 | 11.707 | 13.567 | 8.466 | 0.805 | 5.525 | 57.541 | 82.683 | 4.747 | 2.642 | 110.074 | 116.074 | 5.971 |
| 03 | 0.0 | 26.433 | 0.0 | 0.0 | 0.0 | 188.92 | 2.012 | 2.725 | 0.832 | 249.343 | 2.145 | 11.535 | 0.0 | 11.505 | 0.84 | 0.0 |
| 04 | 0.832 | 0.0 | 0.0 | 0.0 | 461.032 | 0.0 | 6.478 | 8.692 | 2.946 | 0.0 | 0.0 | 2.052 | 3.529 | 8.896 | 1.834 | 0.0 |
| 05 | 5.73 | 34.603 | 403.597 | 24.409 | 0.0 | 0.0 | 0.0 | 8.896 | 0.0 | 2.11 | 3.393 | 2.809 | 0.0 | 1.282 | 9.461 | 0.0 |
| 06 | 0.0 | 0.0 | 5.73 | 0.0 | 0.0 | 31.012 | 6.983 | 0.0 | 3.856 | 223.763 | 186.553 | 2.279 | 0.0 | 9.307 | 26.807 | 0.0 |
| 07 | 0.0 | 0.0 | 0.985 | 2.871 | 0.885 | 0.0 | 0.0 | 263.197 | 2.786 | 0.823 | 1.015 | 221.45 | 0.0 | 0.0 | 0.0 | 2.279 |
| 08 | 0.0 | 0.0 | 3.671 | 0.0 | 0.0 | 0.0 | 0.0 | 0.823 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 91.918 | 387.24 | 10.639 |
| 09 | 0.0 | 0.0 | 0.0 | 0.0 | 5.219 | 83.064 | 0.905 | 2.731 | 18.329 | 108.527 | 143.389 | 122.666 | 0.929 | 5.696 | 4.837 | 0.0 |
| 10 | 3.786 | 0.966 | 13.772 | 5.951 | 33.578 | 9.999 | 15.703 | 138.007 | 11.927 | 30.766 | 82.06 | 24.377 | 7.271 | 18.511 | 93.343 | 6.272 |
| 11 | 5.609 | 1.928 | 48.09 | 0.934 | 21.501 | 18.636 | 3.629 | 16.476 | 34.574 | 52.612 | 86.215 | 31.477 | 81.816 | 16.595 | 60.226 | 15.971 |
| 12 | 2.877 | 104.224 | 28.258 | 8.141 | 25.723 | 25.045 | 9.621 | 29.381 | 32.989 | 76.556 | 57.01 | 31.605 | 0.863 | 16.014 | 43.62 | 4.362 |
| 13 | 4.448 | 4.442 | 48.135 | 5.426 | 151.611 | 19.65 | 8.247 | 42.331 | 19.271 | 22.958 | 52.707 | 43.573 | 7.915 | 10.083 | 46.821 | 8.671 |
| 14 | 4.084 | 6.743 | 169.179 | 3.24 | 23.07 | 13.37 | 7.147 | 13.546 | 22.758 | 40.873 | 78.392 | 13.887 | 3.812 | 11.012 | 82.429 | 2.75 |
| 15 | 5.344 | 12.844 | 31.2 | 4.336 | 13.679 | 15.233 | 2.667 | 40.418 | 26.549 | 78.057 | 105.454 | 127.087 | 0.0 | 1.718 | 21.993 | 9.712 |
| 16 | 4.216 | 3.655 | 34.837 | 2.864 | 55.985 | 7.179 | 9.343 | 35.346 | 33.702 | 16.521 | 87.629 | 23.462 | 4.688 | 3.461 | 164.959 | 8.445 |
| 17 | 1.757 | 15.082 | 72.665 | 9.085 | 6.247 | 4.345 | 3.592 | 16.631 | 11.767 | 29.458 | 132.258 | 123.285 | 3.785 | 4.739 | 56.237 | 5.356 |
| 18 | 3.619 | 5.326 | 14.611 | 0.0 | 22.616 | 14.37 | 7.346 | 9.292 | 68.081 | 89.33 | 90.777 | 16.564 | 4.547 | 9.286 | 137.981 | 2.544 |
| 19 | 18.624 | 36.974 | 36.153 | 7.112 | 34.456 | 30.608 | 5.354 | 47.894 | 23.073 | 128.309 | 36.016 | 63.317 | 1.877 | 9.474 | 17.049 | 0.0 |
| 20 | 18.891 | 6.57 | 50.05 | 2.519 | 132.144 | 20.45 | 10.71 | 42.059 | 19.647 | 19.545 | 45.791 | 9.59 | 6.007 | 13.874 | 90.149 | 8.292 |
| 21 | 5.237 | 16.326 | 59.986 | 95.142 | 10.452 | 21.819 | 1.801 | 26.367 | 9.776 | 55.509 | 80.247 | 51.168 | 0.823 | 3.645 | 45.188 | 12.804 |
| 22 | 2.742 | 12.648 | 8.374 | 2.523 | 38.517 | 23.229 | 3.67 | 31.882 | 18.983 | 46.667 | 69.456 | 52.116 | 4.484 | 14.624 | 65.014 | 101.36 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.564 | -1.194 | 0.354 | -0.634 | 0.028 | -1.501 | -0.792 | 0.822 | -0.169 | -0.896 | 0.398 | 0.351 | -3.14 | -1.536 | 0.388 | 1.194 |
| 02 | -1.509 | -0.893 | 0.596 | -3.256 | -0.954 | -0.811 | -1.266 | -3.271 | -1.67 | 0.612 | 0.973 | -1.811 | -2.338 | 1.258 | 1.311 | -1.597 |
| 03 | -4.394 | -0.158 | -4.394 | -4.394 | -4.394 | 1.796 | -2.571 | -2.311 | -3.249 | 2.073 | -2.518 | -0.969 | -4.394 | -0.971 | -3.242 | -4.394 |
| 04 | -3.249 | -4.394 | -4.394 | -4.394 | 2.687 | -4.394 | -1.52 | -1.241 | -2.243 | -4.394 | -4.394 | -2.555 | -2.082 | -1.219 | -2.648 | -4.394 |
| 05 | -1.636 | 0.108 | 2.554 | -0.236 | -4.394 | -4.394 | -4.394 | -1.219 | -4.394 | -2.531 | -2.117 | -2.285 | -4.394 | -2.934 | -1.16 | -4.394 |
| 06 | -4.394 | -4.394 | -1.636 | -4.394 | -4.394 | -0.0 | -1.449 | -4.394 | -2.002 | 1.965 | 1.784 | -2.466 | -4.394 | -1.175 | -0.144 | -4.394 |
| 07 | -4.394 | -4.394 | -3.13 | -2.266 | -3.206 | -4.394 | -4.394 | 2.127 | -2.292 | -3.256 | -3.108 | 1.955 | -4.394 | -4.394 | -4.394 | -2.466 |
| 08 | -4.394 | -4.394 | -2.046 | -4.394 | -4.394 | -4.394 | -4.394 | -3.256 | -4.394 | -4.394 | -2.576 | -4.394 | -4.394 | 1.078 | 2.513 | -1.047 |
| 09 | -4.394 | -4.394 | -4.394 | -4.394 | -1.723 | 0.977 | -3.19 | -2.31 | -0.518 | 1.244 | 1.521 | 1.366 | -3.172 | -1.641 | -1.794 | -4.394 |
| 10 | -2.018 | -3.144 | -0.797 | -1.6 | 0.078 | -1.106 | -0.669 | 1.483 | -0.936 | -0.008 | 0.965 | -0.238 | -1.411 | -0.508 | 1.093 | -1.551 |
| 11 | -1.656 | -2.607 | 0.434 | -3.168 | -0.361 | -0.501 | -2.056 | -0.622 | 0.107 | 0.523 | 1.014 | 0.015 | 0.962 | -0.615 | 0.658 | -0.652 |
| 12 | -2.264 | 1.203 | -0.092 | -1.304 | -0.185 | -0.211 | -1.143 | -0.054 | 0.061 | 0.896 | 0.603 | 0.019 | -3.223 | -0.65 | 0.337 | -1.889 |
| 13 | -1.871 | -1.872 | 0.435 | -1.687 | 1.577 | -0.449 | -1.291 | 0.308 | -0.468 | -0.297 | 0.525 | 0.336 | -1.33 | -1.098 | 0.408 | -1.243 |
| 14 | -1.949 | -1.483 | 1.686 | -2.158 | -0.292 | -0.825 | -1.427 | -0.813 | -0.305 | 0.273 | 0.92 | -0.788 | -2.012 | -1.013 | 0.97 | -2.304 |
| 15 | -1.701 | -0.864 | 0.006 | -1.894 | -0.803 | -0.698 | -2.33 | 0.262 | -0.154 | 0.915 | 1.215 | 1.401 | -4.394 | -2.702 | -0.339 | -1.135 |
| 16 | -1.92 | -2.05 | 0.115 | -2.268 | 0.585 | -1.423 | -1.172 | 0.129 | 0.082 | -0.619 | 1.031 | -0.275 | -1.823 | -2.099 | 1.661 | -1.269 |
| 17 | -2.684 | -0.708 | 0.844 | -1.199 | -1.555 | -1.893 | -2.066 | -0.613 | -0.949 | -0.051 | 1.441 | 1.371 | -2.018 | -1.812 | 0.589 | -1.699 |
| 18 | -2.059 | -1.704 | -0.739 | -4.394 | -0.311 | -0.755 | -1.401 | -1.177 | 0.779 | 1.05 | 1.066 | -0.617 | -1.851 | -1.178 | 1.483 | -2.371 |
| 19 | -0.502 | 0.174 | 0.151 | -1.432 | 0.104 | -0.013 | -1.699 | 0.43 | -0.292 | 1.41 | 0.148 | 0.707 | -2.629 | -1.158 | -0.588 | -4.394 |
| 20 | -0.488 | -1.507 | 0.474 | -2.38 | 1.44 | -0.41 | -1.04 | 0.301 | -0.449 | -0.455 | 0.386 | -1.147 | -1.591 | -0.789 | 1.059 | -1.286 |
| 21 | -1.72 | -0.631 | 0.654 | 1.112 | -1.064 | -0.347 | -2.664 | -0.16 | -1.128 | 0.577 | 0.943 | 0.496 | -3.256 | -2.053 | 0.372 | -0.867 |
| 22 | -2.306 | -0.879 | -1.277 | -2.378 | 0.214 | -0.285 | -2.046 | 0.027 | -0.483 | 0.404 | 0.799 | 0.514 | -1.864 | -0.738 | 0.734 | 1.175 |