Model info
| Transcription factor | TFAP4 | ||||||||
| Model | TFAP4_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Consensus | vYCAGCTGYvG | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 14 | ||||||||
| TF family | bHLH-ZIP factors{1.2.6} | ||||||||
| TF subfamily | AP-4{1.2.6.4} | ||||||||
| HGNC | 11745 | ||||||||
| EntrezGene | 7023 | ||||||||
| UniProt ID | TFAP4_HUMAN | ||||||||
| UniProt AC | Q01664 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.215 | 2.314 | 6.694 | 0.992 |
| 02 | 2.975 | 6.942 | 0.0 | 4.298 |
| 03 | 0.0 | 14.215 | 0.0 | 0.0 |
| 04 | 14.215 | 0.0 | 0.0 | 0.0 |
| 05 | 0.0 | 0.0 | 14.215 | 0.0 |
| 06 | 0.0 | 14.215 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 1.322 | 12.893 |
| 08 | 0.0 | 0.0 | 14.215 | 0.0 |
| 09 | 0.0 | 7.438 | 1.157 | 5.62 |
| 10 | 2.975 | 2.479 | 7.107 | 1.653 |
| 11 | 0.0 | 2.479 | 11.736 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.146 | -0.348 | 0.557 | -0.935 |
| 02 | -0.148 | 0.59 | -1.849 | 0.162 |
| 03 | -1.849 | 1.261 | -1.849 | -1.849 |
| 04 | 1.261 | -1.849 | -1.849 | -1.849 |
| 05 | -1.849 | -1.849 | 1.261 | -1.849 |
| 06 | -1.849 | 1.261 | -1.849 | -1.849 |
| 07 | -1.849 | -1.849 | -0.753 | 1.168 |
| 08 | -1.849 | -1.849 | 1.261 | -1.849 |
| 09 | -1.849 | 0.653 | -0.84 | 0.399 |
| 10 | -0.148 | -0.294 | 0.611 | -0.599 |
| 11 | -1.849 | -0.294 | 1.078 | -1.849 |