TF65_MOUSE.H10DI.C motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

Rela

Model

TF65_MOUSE.H10DI.C

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

ChIP-Seq

Model length

23

Quality

C

Consensus

nRGRRWKYCCMndvYKdbnhMMn

wAUC

0.8395047729499199

Best AUC

0.8395047729499199

Benchmark datasets

1

Aligned words

500

TF family

NF-kappaB-related factors{6.1.1}

TF subfamily

NF-kappaB p65 subunit-like factors{6.1.1.2}

MGI

103290

EntrezGene

19697

UniProt ID

TF65_MOUSE

UniProt AC

Q04207

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	7.5461
0.0005	9.3671
0.0001	13.1691

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	16.31	4.006	72.225	4.828	32.383	4.125	22.455	24.593	12.633	0.955	161.466	0.937	7.836	3.074	125.36	6.814
02	27.211	0.0	39.088	2.863	7.157	0.0	2.064	2.939	25.603	1.934	320.271	33.698	2.818	0.0	28.617	5.737
03	58.586	1.064	1.015	2.125	0.984	0.0	0.0	0.95	241.397	15.756	122.841	10.046	19.743	5.774	14.683	5.036
04	237.87	35.518	45.207	2.115	17.865	2.839	0.0	1.891	74.365	21.753	30.355	12.067	7.183	4.914	3.054	3.006
05	179.697	11.717	30.039	115.829	14.799	0.0	0.0	50.225	27.868	7.814	0.0	42.934	2.933	1.01	0.0	15.135
06	35.924	36.259	51.767	101.347	0.0	1.971	0.0	18.569	4.995	0.968	2.078	21.999	7.039	4.948	30.951	181.185
07	6.02	17.852	3.978	20.109	1.036	16.985	0.0	26.125	2.968	21.312	8.885	51.632	6.074	50.896	14.305	251.824
08	2.999	13.099	0.0	0.0	6.867	99.228	0.0	0.95	3.059	23.141	0.0	0.967	14.322	297.289	3.052	35.027
09	0.968	24.307	1.971	0.0	13.802	401.995	0.0	16.96	0.0	0.953	0.0	2.1	0.93	27.502	0.919	7.594
10	5.69	6.247	2.817	0.946	176.711	224.729	9.081	44.237	0.992	0.979	0.0	0.919	9.115	7.029	8.507	2.003
11	35.081	32.027	81.459	43.94	98.602	71.436	15.042	53.903	7.514	8.078	0.0	4.812	10.405	11.086	18.824	7.789
12	43.004	8.997	69.75	29.853	49.75	21.083	9.209	42.586	36.638	12.103	31.97	34.615	32.887	10.043	23.765	43.75
13	77.834	25.108	46.253	13.083	30.978	5.977	8.084	7.186	60.964	28.384	31.5	13.845	36.707	48.084	50.091	15.923
14	28.568	24.759	7.148	146.008	8.37	17.952	3.932	77.299	21.983	20.79	4.873	88.282	3.805	6.888	7.108	32.235
15	13.833	9.216	23.742	15.935	13.904	6.05	2.8	47.635	4.325	1.983	6.858	9.895	7.745	20.109	86.113	229.857
16	5.073	3.761	17.092	13.882	15.054	5.969	1.119	15.216	35.606	17.813	21.779	44.314	41.491	34.786	149.339	77.707
17	14.982	50.05	17.533	14.659	7.884	24.533	0.0	29.912	32.669	100.597	27.101	28.963	12.783	85.487	31.194	21.654
18	12.079	15.648	35.592	4.999	91.301	67.257	22.15	79.957	4.824	15.851	32.411	22.742	5.715	15.184	57.603	16.686
19	28.212	38.716	24.884	22.107	32.751	43.149	4.797	33.243	47.847	55.431	5.02	39.459	26.299	58.237	6.004	33.845
20	73.806	42.057	18.318	0.927	137.518	51.243	0.0	6.773	16.902	16.889	4.934	1.981	51.48	57.371	15.059	4.744
21	200.093	22.441	38.565	18.607	101.581	35.857	0.957	29.165	8.159	13.945	4.225	11.981	2.884	0.917	7.82	2.804
22	34.06	75.982	89.066	113.608	21.646	23.791	4.861	22.862	7.048	15.114	15.377	14.027	9.853	22.494	9.852	20.357

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	-0.639	-1.974	0.831	-1.803	0.035	-1.947	-0.326	-0.236	-0.888	-3.159	1.632	-3.173	-1.347	-2.213	1.38	-1.48
02	-0.137	-4.4	0.221	-2.275	-1.433	-4.4	-2.557	-2.252	-0.197	-2.612	2.316	0.075	-2.289	-4.4	-0.087	-1.642
03	0.623	-3.081	-3.116	-2.533	-3.138	-4.4	-4.4	-3.163	2.034	-0.673	1.36	-1.109	-0.452	-1.636	-0.742	-1.763
04	2.019	0.127	0.365	-2.537	-0.55	-2.283	-4.4	-2.631	0.86	-0.357	-0.029	-0.932	-1.43	-1.786	-2.218	-2.232
05	1.739	-0.961	-0.039	1.301	-0.734	-4.4	-4.4	0.47	-0.113	-1.35	-4.4	0.314	-2.254	-3.119	-4.4	-0.712
06	0.138	0.147	0.5	1.168	-4.4	-2.596	-4.4	-0.512	-1.771	-3.149	-2.552	-0.346	-1.449	-1.78	-0.009	1.747
07	-1.597	-0.551	-1.981	-0.434	-3.101	-0.599	-4.4	-0.177	-2.244	-0.377	-1.227	0.497	-1.588	0.483	-0.767	2.076
08	-2.234	-0.853	-4.4	-4.4	-1.473	1.147	-4.4	-3.163	-2.217	-0.296	-4.4	-3.15	-0.766	2.242	-2.219	0.113
09	-3.149	-0.248	-2.596	-4.4	-0.802	2.543	-4.4	-0.601	-4.4	-3.161	-4.4	-2.543	-3.178	-0.126	-3.187	-1.377
10	-1.65	-1.562	-2.289	-3.166	1.722	1.962	-1.206	0.344	-3.132	-3.141	-4.4	-3.187	-1.203	-1.451	-1.269	-2.582
11	0.114	0.024	0.95	0.337	1.141	0.82	-0.718	0.54	-1.387	-1.318	-4.4	-1.806	-1.075	-1.014	-0.499	-1.353
12	0.316	-1.215	0.796	-0.045	0.46	-0.388	-1.193	0.306	0.157	-0.929	0.022	0.101	0.05	-1.11	-0.27	0.333
13	0.905	-0.216	0.388	-0.854	-0.009	-1.604	-1.318	-1.43	0.662	-0.095	0.008	-0.799	0.159	0.427	0.467	-0.663
14	-0.089	-0.23	-1.435	1.532	-1.284	-0.545	-1.991	0.898	-0.347	-0.401	-1.794	1.031	-2.021	-1.47	-1.44	0.031
15	-0.8	-1.192	-0.271	-0.662	-0.795	-1.592	-2.295	0.417	-1.904	-2.591	-1.474	-1.124	-1.358	-0.434	1.006	1.985
16	-1.757	-2.031	-0.593	-0.796	-0.717	-1.605	-3.044	-0.707	0.129	-0.553	-0.356	0.346	0.28	0.106	1.554	0.904
17	-0.722	0.466	-0.568	-0.743	-1.341	-0.239	-4.4	-0.043	0.044	1.161	-0.141	-0.075	-0.876	0.999	-0.002	-0.361
18	-0.931	-0.68	0.129	-1.77	1.064	0.76	-0.339	0.932	-1.803	-0.667	0.036	-0.313	-1.645	-0.709	0.606	-0.617
19	-0.101	0.212	-0.225	-0.341	0.046	0.319	-1.808	0.061	0.422	0.568	-1.766	0.231	-0.17	0.617	-1.599	0.079
20	0.852	0.294	-0.525	-3.181	1.472	0.49	-4.4	-1.486	-0.604	-0.605	-1.783	-2.592	0.494	0.602	-0.717	-1.819
21	1.846	-0.326	0.208	-0.51	1.17	0.136	-3.158	-0.068	-1.309	-0.792	-1.925	-0.939	-2.269	-3.188	-1.349	-2.294
22	0.085	0.881	1.039	1.282	-0.362	-0.269	-1.796	-0.308	-1.448	-0.713	-0.697	-0.786	-1.128	-0.324	-1.128	-0.422