Model info
| Transcription factor | Tef | ||||||||
| Model | TEF_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | TGdTKAYRTMdvYd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 14 | ||||||||
| TF family | C/EBP-related{1.1.8} | ||||||||
| TF subfamily | PAR factors{1.1.8.2} | ||||||||
| MGI | 98663 | ||||||||
| EntrezGene | 21685 | ||||||||
| UniProt ID | TEF_MOUSE | ||||||||
| UniProt AC | Q9JLC6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.676 | 1.853 | 0.676 | 10.794 |
| 02 | 2.118 | 0.0 | 10.706 | 1.176 |
| 03 | 3.176 | 1.059 | 2.941 | 6.824 |
| 04 | 0.0 | 0.0 | 0.0 | 14.0 |
| 05 | 3.176 | 0.0 | 3.412 | 7.412 |
| 06 | 13.176 | 0.0 | 0.824 | 0.0 |
| 07 | 1.059 | 3.882 | 0.0 | 9.059 |
| 08 | 4.353 | 0.0 | 8.824 | 0.824 |
| 09 | 0.0 | 0.588 | 2.118 | 11.294 |
| 10 | 8.706 | 3.412 | 1.059 | 0.824 |
| 11 | 9.765 | 0.0 | 2.118 | 2.118 |
| 12 | 6.0 | 4.353 | 2.588 | 1.059 |
| 13 | 0.588 | 2.824 | 2.118 | 8.471 |
| 14 | 2.529 | 0.412 | 5.941 | 5.118 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.136 | -0.504 | -1.136 | 1.013 |
| 02 | -0.404 | -1.841 | 1.005 | -0.818 |
| 03 | -0.081 | -0.884 | -0.144 | 0.587 |
| 04 | -1.841 | -1.841 | -1.841 | 1.26 |
| 05 | -0.081 | -1.841 | -0.021 | 0.663 |
| 06 | 1.202 | -1.841 | -1.031 | -1.841 |
| 07 | -0.884 | 0.088 | -1.841 | 0.849 |
| 08 | 0.187 | -1.841 | 0.824 | -1.031 |
| 09 | -1.841 | -1.204 | -0.404 | 1.056 |
| 10 | 0.812 | -0.021 | -0.884 | -1.031 |
| 11 | 0.919 | -1.841 | -0.404 | -0.404 |
| 12 | 0.471 | 0.187 | -0.247 | -0.884 |
| 13 | -1.204 | -0.177 | -0.404 | 0.786 |
| 14 | -0.266 | -1.356 | 0.462 | 0.328 |