Model info
| Transcription factor | Tbx3 | ||||||||
| Model | TBX3_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 24 | ||||||||
| Quality | D | ||||||||
| Consensus | MRKWWGRSdnYYAGGTGATAARWM | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 10 | ||||||||
| TF family | TBX2-related factors{6.5.4} | ||||||||
| TF subfamily | TBX3{6.5.4.0.2} | ||||||||
| MGI | 98495 | ||||||||
| EntrezGene | 21386 | ||||||||
| UniProt ID | TBX3_MOUSE | ||||||||
| UniProt AC | P70324 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 5.222 | 1.293 | 0.743 | 0.743 |
| 02 | 1.98 | 0.0 | 5.47 | 0.55 |
| 03 | 0.0 | 0.99 | 4.48 | 2.53 |
| 04 | 3.49 | 0.0 | 0.99 | 3.52 |
| 05 | 4.307 | 0.0 | 1.713 | 1.98 |
| 06 | 0.0 | 1.98 | 6.02 | 0.0 |
| 07 | 4.307 | 1.54 | 2.153 | 0.0 |
| 08 | 1.54 | 2.97 | 3.49 | 0.0 |
| 09 | 5.47 | 0.55 | 0.99 | 0.99 |
| 10 | 3.49 | 2.53 | 0.99 | 0.99 |
| 11 | 0.55 | 1.98 | 0.0 | 5.47 |
| 12 | 0.0 | 1.98 | 0.55 | 5.47 |
| 13 | 8.0 | 0.0 | 0.0 | 0.0 |
| 14 | 0.0 | 0.0 | 8.0 | 0.0 |
| 15 | 1.163 | 0.0 | 6.837 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 8.0 |
| 17 | 0.0 | 3.49 | 4.51 | 0.0 |
| 18 | 4.04 | 0.0 | 0.0 | 3.96 |
| 19 | 0.0 | 0.0 | 3.52 | 4.48 |
| 20 | 6.287 | 1.713 | 0.0 | 0.0 |
| 21 | 6.02 | 0.0 | 1.98 | 0.0 |
| 22 | 4.133 | 0.99 | 2.876 | 0.0 |
| 23 | 4.48 | 1.54 | 0.0 | 1.98 |
| 24 | 4.554 | 1.411 | 0.798 | 1.238 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.824 | -0.33 | -0.691 | -0.691 |
| 02 | -0.008 | -1.578 | 0.866 | -0.857 |
| 03 | -1.578 | -0.512 | 0.685 | 0.191 |
| 04 | 0.464 | -1.578 | -0.512 | 0.472 |
| 05 | 0.65 | -1.578 | -0.121 | -0.008 |
| 06 | -1.578 | -0.008 | 0.954 | -1.578 |
| 07 | 0.65 | -0.202 | 0.059 | -1.578 |
| 08 | -0.202 | 0.326 | 0.464 | -1.578 |
| 09 | 0.866 | -0.857 | -0.512 | -0.512 |
| 10 | 0.464 | 0.191 | -0.512 | -0.512 |
| 11 | -0.857 | -0.008 | -1.578 | 0.866 |
| 12 | -1.578 | -0.008 | -0.857 | 0.866 |
| 13 | 1.218 | -1.578 | -1.578 | -1.578 |
| 14 | -1.578 | -1.578 | 1.218 | -1.578 |
| 15 | -0.404 | -1.578 | 1.071 | -1.578 |
| 16 | -1.578 | -1.578 | -1.578 | 1.218 |
| 17 | -1.578 | 0.464 | 0.691 | -1.578 |
| 18 | 0.593 | -1.578 | -1.578 | 0.575 |
| 19 | -1.578 | -1.578 | 0.472 | 0.685 |
| 20 | 0.994 | -0.121 | -1.578 | -1.578 |
| 21 | 0.954 | -1.578 | -0.008 | -1.578 |
| 22 | 0.613 | -0.512 | 0.298 | -1.578 |
| 23 | 0.685 | -0.202 | -1.578 | -0.008 |
| 24 | 0.7 | -0.266 | -0.649 | -0.36 |