Model info
Transcription factorTbx3
ModelTBX3_MOUSE.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length24
Quality
D
ConsensusMRKWWGRSdnYYAGGTGATAARWM
wAUC
Best AUC
Benchmark datasets
Aligned words10
TF familyTBX2-related factors{6.5.4}
TF subfamilyTBX3{6.5.4.0.2}
MGI98495
EntrezGene21386
UniProt IDTBX3_MOUSE
UniProt ACP70324
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.1321
0.0005 5.0381
0.0001 6.9401
PCM
ACGT
015.2221.2930.7430.743
021.980.05.470.55
030.00.994.482.53
043.490.00.993.52
054.3070.01.7131.98
060.01.986.020.0
074.3071.542.1530.0
081.542.973.490.0
095.470.550.990.99
103.492.530.990.99
110.551.980.05.47
120.01.980.555.47
138.00.00.00.0
140.00.08.00.0
151.1630.06.8370.0
160.00.00.08.0
170.03.494.510.0
184.040.00.03.96
190.00.03.524.48
206.2871.7130.00.0
216.020.01.980.0
224.1330.992.8760.0
234.481.540.01.98
244.5541.4110.7981.238
PWM
ACGT
010.824-0.33-0.691-0.691
02-0.008-1.5780.866-0.857
03-1.578-0.5120.6850.191
040.464-1.578-0.5120.472
050.65-1.578-0.121-0.008
06-1.578-0.0080.954-1.578
070.65-0.2020.059-1.578
08-0.2020.3260.464-1.578
090.866-0.857-0.512-0.512
100.4640.191-0.512-0.512
11-0.857-0.008-1.5780.866
12-1.578-0.008-0.8570.866
131.218-1.578-1.578-1.578
14-1.578-1.5781.218-1.578
15-0.404-1.5781.071-1.578
16-1.578-1.578-1.5781.218
17-1.5780.4640.691-1.578
180.593-1.578-1.5780.575
19-1.578-1.5780.4720.685
200.994-0.121-1.578-1.578
210.954-1.578-0.008-1.578
220.613-0.5120.298-1.578
230.685-0.202-1.578-0.008
240.7-0.266-0.649-0.36