Model info
| Transcription factor | Tbx20 | ||||||||
| Model | TBX20_MOUSE.H10DI.C | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 21 | ||||||||
| Quality | C | ||||||||
| Consensus | nnnnnnnvdSTGnTGACAKvn | ||||||||
| wAUC | 0.8141096795432899 | ||||||||
| Best AUC | 0.8141096795432899 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | TBX1-related factors{6.5.3} | ||||||||
| TF subfamily | TBX20{6.5.3.0.5} | ||||||||
| MGI | 1888496 | ||||||||
| EntrezGene | 57246 | ||||||||
| UniProt ID | TBX20_MOUSE | ||||||||
| UniProt AC | Q9ES03 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 27.911 | 26.165 | 43.344 | 11.135 | 95.786 | 31.235 | 12.236 | 26.752 | 35.556 | 24.027 | 52.426 | 17.917 | 13.364 | 25.895 | 32.629 | 23.622 |
| 02 | 16.994 | 61.738 | 79.544 | 14.343 | 36.526 | 34.073 | 6.322 | 30.401 | 44.069 | 42.396 | 33.348 | 20.822 | 12.346 | 24.564 | 29.562 | 12.954 |
| 03 | 18.407 | 18.171 | 60.369 | 12.987 | 50.116 | 58.638 | 6.944 | 47.072 | 33.442 | 41.696 | 50.184 | 23.453 | 9.377 | 19.157 | 35.929 | 14.057 |
| 04 | 31.183 | 15.395 | 47.202 | 17.563 | 44.178 | 52.245 | 8.153 | 33.086 | 57.797 | 31.816 | 39.865 | 23.948 | 11.215 | 17.454 | 43.557 | 25.343 |
| 05 | 26.939 | 26.72 | 77.334 | 13.379 | 31.953 | 41.958 | 6.959 | 36.041 | 32.837 | 41.807 | 54.619 | 9.515 | 7.733 | 33.635 | 39.939 | 18.633 |
| 06 | 17.846 | 13.013 | 56.099 | 12.503 | 56.544 | 15.602 | 15.061 | 56.912 | 35.307 | 39.535 | 64.134 | 39.875 | 6.51 | 16.075 | 40.257 | 14.726 |
| 07 | 26.065 | 22.29 | 50.549 | 17.302 | 44.528 | 12.346 | 14.317 | 13.034 | 72.208 | 30.276 | 43.93 | 29.137 | 18.168 | 20.22 | 72.755 | 12.873 |
| 08 | 30.7 | 10.114 | 105.51 | 14.645 | 36.896 | 13.169 | 10.193 | 24.875 | 51.326 | 29.58 | 73.83 | 26.816 | 6.774 | 7.754 | 50.601 | 7.218 |
| 09 | 2.829 | 15.117 | 103.552 | 4.199 | 5.78 | 29.453 | 13.075 | 12.309 | 8.405 | 81.544 | 140.649 | 9.536 | 3.292 | 13.602 | 50.195 | 6.466 |
| 10 | 2.196 | 4.326 | 1.085 | 12.698 | 4.031 | 10.612 | 1.975 | 123.096 | 13.834 | 32.497 | 6.912 | 254.228 | 0.0 | 0.0 | 1.984 | 30.525 |
| 11 | 0.0 | 1.071 | 17.879 | 1.111 | 5.036 | 0.955 | 31.338 | 10.106 | 1.146 | 0.838 | 9.972 | 0.0 | 9.402 | 4.762 | 399.915 | 6.468 |
| 12 | 0.0 | 2.93 | 8.192 | 4.463 | 1.965 | 3.598 | 0.0 | 2.064 | 76.072 | 154.706 | 100.539 | 127.788 | 2.93 | 3.818 | 7.333 | 3.604 |
| 13 | 5.065 | 1.386 | 6.286 | 68.23 | 10.54 | 0.0 | 2.91 | 151.601 | 21.147 | 0.0 | 6.642 | 88.275 | 5.237 | 2.097 | 21.403 | 109.182 |
| 14 | 2.225 | 0.913 | 38.043 | 0.808 | 1.026 | 0.0 | 1.071 | 1.386 | 1.01 | 1.524 | 34.707 | 0.0 | 3.526 | 2.783 | 410.979 | 0.0 |
| 15 | 6.922 | 0.0 | 0.865 | 0.0 | 4.135 | 0.0 | 0.0 | 1.085 | 432.003 | 24.161 | 24.795 | 3.84 | 2.194 | 0.0 | 0.0 | 0.0 |
| 16 | 47.13 | 364.889 | 22.639 | 10.596 | 2.346 | 21.815 | 0.0 | 0.0 | 2.024 | 21.021 | 2.615 | 0.0 | 1.961 | 1.893 | 1.071 | 0.0 |
| 17 | 46.771 | 0.0 | 5.754 | 0.935 | 393.515 | 2.715 | 9.641 | 3.747 | 19.886 | 1.743 | 2.807 | 1.89 | 6.057 | 0.0 | 1.899 | 2.64 |
| 18 | 43.977 | 17.347 | 358.961 | 45.945 | 0.913 | 0.808 | 0.935 | 1.802 | 1.812 | 4.313 | 12.109 | 1.868 | 1.89 | 0.0 | 6.484 | 0.838 |
| 19 | 8.049 | 7.482 | 32.171 | 0.89 | 8.892 | 1.702 | 5.791 | 6.081 | 40.523 | 155.765 | 153.226 | 28.975 | 1.947 | 9.965 | 32.281 | 6.259 |
| 20 | 9.537 | 16.11 | 18.267 | 15.498 | 51.777 | 35.154 | 8.628 | 79.354 | 82.883 | 53.007 | 49.451 | 38.129 | 6.756 | 1.882 | 16.065 | 17.501 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.112 | -0.175 | 0.324 | -1.01 | 1.112 | -0.0 | -0.919 | -0.153 | 0.128 | -0.259 | 0.512 | -0.547 | -0.833 | -0.185 | 0.043 | -0.276 |
| 02 | -0.599 | 0.675 | 0.927 | -0.764 | 0.154 | 0.085 | -1.551 | -0.027 | 0.34 | 0.302 | 0.064 | -0.4 | -0.91 | -0.237 | -0.055 | -0.863 |
| 03 | -0.521 | -0.533 | 0.653 | -0.861 | 0.468 | 0.624 | -1.462 | 0.406 | 0.067 | 0.285 | 0.469 | -0.283 | -1.176 | -0.482 | 0.138 | -0.784 |
| 04 | -0.002 | -0.695 | 0.408 | -0.567 | 0.343 | 0.509 | -1.309 | 0.056 | 0.609 | 0.018 | 0.241 | -0.262 | -1.003 | -0.573 | 0.329 | -0.207 |
| 05 | -0.146 | -0.155 | 0.899 | -0.832 | 0.022 | 0.292 | -1.46 | 0.141 | 0.049 | 0.288 | 0.553 | -1.161 | -1.36 | 0.073 | 0.243 | -0.509 |
| 06 | -0.551 | -0.859 | 0.58 | -0.898 | 0.587 | -0.682 | -0.717 | 0.594 | 0.121 | 0.233 | 0.713 | 0.241 | -1.523 | -0.653 | 0.251 | -0.739 |
| 07 | -0.179 | -0.333 | 0.476 | -0.581 | 0.35 | -0.91 | -0.766 | -0.857 | 0.831 | -0.031 | 0.337 | -0.069 | -0.534 | -0.429 | 0.838 | -0.869 |
| 08 | -0.018 | -1.103 | 1.208 | -0.744 | 0.164 | -0.847 | -1.095 | -0.225 | 0.491 | -0.054 | 0.853 | -0.151 | -1.486 | -1.357 | 0.477 | -1.425 |
| 09 | -2.286 | -0.713 | 1.189 | -1.931 | -1.635 | -0.058 | -0.854 | -0.913 | -1.28 | 0.952 | 1.495 | -1.159 | -2.151 | -0.816 | 0.469 | -1.53 |
| 10 | -2.505 | -1.904 | -3.067 | -0.883 | -1.968 | -1.056 | -2.594 | 1.362 | -0.8 | 0.039 | -1.466 | 2.085 | -4.4 | -4.4 | -2.59 | -0.023 |
| 11 | -4.4 | -3.076 | -0.549 | -3.049 | -1.763 | -3.159 | 0.003 | -1.103 | -3.026 | -3.251 | -1.116 | -4.4 | -1.173 | -1.815 | 2.538 | -1.529 |
| 12 | -4.4 | -2.255 | -1.305 | -1.875 | -2.599 | -2.072 | -4.4 | -2.557 | 0.882 | 1.59 | 1.16 | 1.399 | -2.255 | -2.018 | -1.41 | -2.07 |
| 13 | -1.758 | -2.881 | -1.556 | 0.774 | -1.063 | -4.4 | -2.261 | 1.569 | -0.385 | -4.4 | -1.504 | 1.03 | -1.727 | -2.544 | -0.373 | 1.242 |
| 14 | -2.494 | -3.191 | 0.195 | -3.275 | -3.108 | -4.4 | -3.076 | -2.881 | -3.119 | -2.806 | 0.104 | -4.4 | -2.09 | -2.3 | 2.565 | -4.4 |
| 15 | -1.465 | -4.4 | -3.229 | -4.4 | -1.945 | -4.4 | -4.4 | -3.067 | 2.615 | -0.254 | -0.228 | -2.012 | -2.506 | -4.4 | -4.4 | -4.4 |
| 16 | 0.407 | 2.446 | -0.318 | -1.058 | -2.449 | -0.354 | -4.4 | -4.4 | -2.574 | -0.391 | -2.355 | -4.4 | -2.6 | -2.629 | -3.076 | -4.4 |
| 17 | 0.399 | -4.4 | -1.639 | -3.174 | 2.522 | -2.322 | -1.149 | -2.035 | -0.445 | -2.698 | -2.293 | -2.631 | -1.591 | -4.4 | -2.627 | -2.346 |
| 18 | 0.338 | -0.579 | 2.43 | 0.381 | -3.191 | -3.275 | -3.174 | -2.67 | -2.666 | -1.907 | -0.929 | -2.641 | -2.631 | -4.4 | -1.527 | -3.251 |
| 19 | -1.322 | -1.391 | 0.029 | -3.209 | -1.226 | -2.717 | -1.633 | -1.587 | 0.257 | 1.596 | 1.58 | -0.075 | -2.606 | -1.117 | 0.032 | -1.56 |
| 20 | -1.159 | -0.651 | -0.528 | -0.689 | 0.5 | 0.116 | -1.255 | 0.924 | 0.968 | 0.523 | 0.454 | 0.197 | -1.488 | -2.634 | -0.654 | -0.57 |