Model info
| Transcription factor | TBX15 | ||||||||
| Model | TBX15_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 19 | ||||||||
| Quality | D | ||||||||
| Consensus | KKKKdKKKddRGGYGGGdd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 6956 | ||||||||
| TF family | TBX1-related factors{6.5.3} | ||||||||
| TF subfamily | TBX15 (TBX14){6.5.3.0.3} | ||||||||
| HGNC | 11594 | ||||||||
| EntrezGene | 6913 | ||||||||
| UniProt ID | TBX15_HUMAN | ||||||||
| UniProt AC | Q96SF7 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 700.5 | 873.5 | 4199.5 | 1178.5 |
| 02 | 490.0 | 497.0 | 4969.0 | 996.0 |
| 03 | 489.0 | 526.0 | 5136.0 | 801.0 |
| 04 | 617.75 | 680.75 | 4460.75 | 1192.75 |
| 05 | 822.75 | 812.75 | 4023.75 | 1292.75 |
| 06 | 726.25 | 601.25 | 4730.25 | 894.25 |
| 07 | 502.5 | 438.5 | 5201.5 | 809.5 |
| 08 | 587.0 | 481.0 | 4977.0 | 907.0 |
| 09 | 1018.5 | 698.5 | 4104.5 | 1130.5 |
| 10 | 1472.75 | 803.75 | 3322.75 | 1352.75 |
| 11 | 1021.25 | 288.25 | 5221.25 | 421.25 |
| 12 | 40.0 | 43.0 | 6844.0 | 25.0 |
| 13 | 133.0 | 105.0 | 6663.0 | 51.0 |
| 14 | 1167.0 | 1418.0 | 340.0 | 4027.0 |
| 15 | 81.0 | 59.0 | 6744.0 | 68.0 |
| 16 | 69.5 | 71.5 | 6108.5 | 702.5 |
| 17 | 167.5 | 294.5 | 6000.5 | 489.5 |
| 18 | 1757.5 | 1020.5 | 2687.5 | 1486.5 |
| 19 | 1646.0 | 893.0 | 3135.0 | 1278.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.907 | -0.687 | 0.881 | -0.388 |
| 02 | -1.263 | -1.249 | 1.05 | -0.556 |
| 03 | -1.265 | -1.192 | 1.083 | -0.773 |
| 04 | -1.032 | -0.935 | 0.942 | -0.376 |
| 05 | -0.746 | -0.759 | 0.839 | -0.296 |
| 06 | -0.871 | -1.059 | 1.0 | -0.663 |
| 07 | -1.238 | -1.373 | 1.095 | -0.763 |
| 08 | -1.083 | -1.281 | 1.051 | -0.649 |
| 09 | -0.534 | -0.91 | 0.859 | -0.429 |
| 10 | -0.165 | -0.77 | 0.647 | -0.25 |
| 11 | -0.531 | -1.79 | 1.099 | -1.413 |
| 12 | -3.719 | -3.65 | 1.37 | -4.158 |
| 13 | -2.555 | -2.787 | 1.343 | -3.487 |
| 14 | -0.398 | -0.203 | -1.626 | 0.84 |
| 15 | -3.04 | -3.347 | 1.355 | -3.21 |
| 16 | -3.189 | -3.162 | 1.256 | -0.904 |
| 17 | -2.328 | -1.769 | 1.238 | -1.264 |
| 18 | 0.011 | -0.532 | 0.435 | -0.156 |
| 19 | -0.054 | -0.665 | 0.589 | -0.307 |