Model info
| Transcription factor | Tal1 | ||||||||
| Model | TAL1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 20 | ||||||||
| Quality | A | ||||||||
| Consensus | bbKbnnnnndvAGATAASvv | ||||||||
| wAUC | 0.9065256501998835 | ||||||||
| Best AUC | 0.9600775252896189 | ||||||||
| Benchmark datasets | 11 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Tal-related factors{1.2.3} | ||||||||
| TF subfamily | Tal / HEN-like factors{1.2.3.1} | ||||||||
| MGI | 98480 | ||||||||
| EntrezGene | 21349 | ||||||||
| UniProt ID | TAL1_MOUSE | ||||||||
| UniProt AC | P22091 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 57.938 | 258.013 | 85.126 | 98.923 |
| 02 | 31.073 | 107.454 | 79.553 | 281.92 |
| 03 | 18.748 | 30.974 | 301.569 | 148.709 |
| 04 | 49.013 | 115.692 | 222.529 | 112.767 |
| 05 | 109.233 | 94.942 | 162.544 | 133.281 |
| 06 | 116.499 | 119.075 | 148.175 | 116.25 |
| 07 | 141.871 | 102.087 | 152.446 | 103.596 |
| 08 | 124.016 | 109.98 | 142.588 | 123.416 |
| 09 | 117.575 | 130.654 | 134.094 | 117.677 |
| 10 | 183.903 | 68.771 | 159.113 | 88.212 |
| 11 | 80.947 | 208.055 | 155.843 | 55.155 |
| 12 | 345.394 | 7.194 | 0.0 | 147.412 |
| 13 | 0.0 | 0.0 | 500.0 | 0.0 |
| 14 | 497.046 | 0.0 | 1.968 | 0.986 |
| 15 | 0.0 | 0.0 | 3.024 | 496.976 |
| 16 | 486.332 | 0.0 | 0.956 | 12.712 |
| 17 | 466.633 | 1.967 | 26.355 | 5.045 |
| 18 | 70.369 | 80.154 | 324.173 | 25.304 |
| 19 | 170.7 | 96.303 | 204.07 | 28.927 |
| 20 | 198.186 | 116.309 | 130.565 | 54.94 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.755 | 0.718 | -0.378 | -0.231 |
| 02 | -1.356 | -0.149 | -0.445 | 0.806 |
| 03 | -1.83 | -1.359 | 0.873 | 0.172 |
| 04 | -0.917 | -0.076 | 0.571 | -0.102 |
| 05 | -0.133 | -0.271 | 0.26 | 0.063 |
| 06 | -0.07 | -0.048 | 0.168 | -0.072 |
| 07 | 0.125 | -0.2 | 0.196 | -0.185 |
| 08 | -0.008 | -0.126 | 0.13 | -0.013 |
| 09 | -0.06 | 0.044 | 0.069 | -0.06 |
| 10 | 0.382 | -0.588 | 0.239 | -0.343 |
| 11 | -0.428 | 0.505 | 0.218 | -0.803 |
| 12 | 1.009 | -2.672 | -4.4 | 0.163 |
| 13 | -4.4 | -4.4 | 1.377 | -4.4 |
| 14 | 1.371 | -4.4 | -3.582 | -3.908 |
| 15 | -4.4 | -4.4 | -3.32 | 1.371 |
| 16 | 1.349 | -4.4 | -3.92 | -2.183 |
| 17 | 1.308 | -3.582 | -1.512 | -2.954 |
| 18 | -0.565 | -0.438 | 0.945 | -1.55 |
| 19 | 0.308 | -0.257 | 0.485 | -1.424 |
| 20 | 0.456 | -0.071 | 0.043 | -0.807 |