Model info
| Transcription factor | TAL1 | ||||||||
| Model | TAL1_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Consensus | bYKbnnnnnnbWGATAAvv | ||||||||
| wAUC | 0.8878704122935956 | ||||||||
| Best AUC | 0.9470983399567947 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Tal-related factors{1.2.3} | ||||||||
| TF subfamily | Tal / HEN-like factors{1.2.3.1} | ||||||||
| HGNC | 11556 | ||||||||
| EntrezGene | 6886 | ||||||||
| UniProt ID | TAL1_HUMAN | ||||||||
| UniProt AC | P17542 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 40.471 | 274.423 | 112.52 | 72.587 |
| 02 | 39.784 | 92.555 | 66.608 | 301.053 |
| 03 | 11.888 | 19.65 | 336.694 | 131.768 |
| 04 | 34.11 | 101.388 | 238.999 | 125.503 |
| 05 | 83.749 | 124.045 | 143.386 | 148.819 |
| 06 | 124.47 | 122.569 | 150.305 | 102.656 |
| 07 | 99.418 | 126.543 | 178.269 | 95.77 |
| 08 | 99.601 | 124.095 | 161.281 | 115.024 |
| 09 | 97.963 | 146.041 | 141.864 | 114.132 |
| 10 | 155.489 | 81.892 | 164.566 | 98.053 |
| 11 | 52.328 | 221.359 | 146.575 | 79.739 |
| 12 | 311.59 | 16.569 | 4.329 | 167.512 |
| 13 | 1.929 | 0.0 | 498.071 | 0.0 |
| 14 | 499.178 | 0.822 | 0.0 | 0.0 |
| 15 | 0.0 | 0.822 | 0.0 | 499.178 |
| 16 | 470.063 | 3.166 | 4.134 | 22.637 |
| 17 | 402.156 | 9.806 | 68.412 | 19.626 |
| 18 | 81.765 | 97.688 | 263.322 | 57.225 |
| 19 | 135.031 | 111.858 | 194.822 | 58.29 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.102 | 0.78 | -0.104 | -0.535 |
| 02 | -1.119 | -0.296 | -0.619 | 0.872 |
| 03 | -2.242 | -1.787 | 0.983 | 0.052 |
| 04 | -1.267 | -0.207 | 0.642 | 0.004 |
| 05 | -0.394 | -0.008 | 0.136 | 0.172 |
| 06 | -0.004 | -0.019 | 0.182 | -0.194 |
| 07 | -0.226 | 0.012 | 0.351 | -0.263 |
| 08 | -0.224 | -0.007 | 0.252 | -0.082 |
| 09 | -0.24 | 0.154 | 0.125 | -0.09 |
| 10 | 0.216 | -0.416 | 0.272 | -0.239 |
| 11 | -0.854 | 0.566 | 0.157 | -0.443 |
| 12 | 0.906 | -1.943 | -3.069 | 0.29 |
| 13 | -3.593 | -4.4 | 1.373 | -4.4 |
| 14 | 1.375 | -3.975 | -4.4 | -4.4 |
| 15 | -4.4 | -3.975 | -4.4 | 1.375 |
| 16 | 1.315 | -3.289 | -3.102 | -1.655 |
| 17 | 1.16 | -2.411 | -0.593 | -1.788 |
| 18 | -0.418 | -0.243 | 0.739 | -0.767 |
| 19 | 0.076 | -0.11 | 0.439 | -0.749 |