Model info
| Transcription factor | Nr5a1 | ||||||||
| Model | STF1_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | hSAAGGhYR | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 120 | ||||||||
| TF family | FTZ-F1-related receptors (NR5){2.1.5} | ||||||||
| TF subfamily | FTZ-F1 (SF-1) (NR5A1){2.1.5.0.1} | ||||||||
| MGI | 1346833 | ||||||||
| EntrezGene | 26423 | ||||||||
| UniProt ID | STF1_MOUSE | ||||||||
| UniProt AC | P33242 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 15.336 | 40.067 | 9.852 | 54.745 |
| 02 | 7.768 | 94.241 | 13.651 | 4.341 |
| 03 | 109.148 | 0.0 | 9.824 | 1.028 |
| 04 | 108.805 | 0.914 | 4.912 | 5.369 |
| 05 | 0.0 | 0.0 | 117.487 | 2.513 |
| 06 | 0.0 | 0.914 | 115.888 | 3.198 |
| 07 | 13.194 | 39.81 | 6.683 | 60.314 |
| 08 | 5.026 | 78.306 | 6.511 | 30.157 |
| 09 | 86.016 | 9.653 | 14.793 | 9.538 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.635 | 0.28 | -1.038 | 0.584 |
| 02 | -1.247 | 1.118 | -0.742 | -1.729 |
| 03 | 1.263 | -3.261 | -1.041 | -2.641 |
| 04 | 1.26 | -2.693 | -1.631 | -1.558 |
| 05 | -3.261 | -3.261 | 1.336 | -2.129 |
| 06 | -3.261 | -2.693 | 1.323 | -1.96 |
| 07 | -0.774 | 0.273 | -1.376 | 0.679 |
| 08 | -1.612 | 0.935 | -1.398 | 0.005 |
| 09 | 1.028 | -1.056 | -0.668 | -1.067 |