Model info
Transcription factorNr5a1
ModelSTF1_MOUSE.H10MO.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length9
Quality
B
ConsensushSAAGGhYR
wAUC
Best AUC
Benchmark datasets
Aligned words120
TF familyFTZ-F1-related receptors (NR5){2.1.5}
TF subfamilyFTZ-F1 (SF-1) (NR5A1){2.1.5.0.1}
MGI1346833
EntrezGene26423
UniProt IDSTF1_MOUSE
UniProt ACP33242
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9369
0.0005 5.6931
0.0001 7.1756
PCM
ACGT
0115.33640.0679.85254.745
027.76894.24113.6514.341
03109.1480.09.8241.028
04108.8050.9144.9125.369
050.00.0117.4872.513
060.00.914115.8883.198
0713.19439.816.68360.314
085.02678.3066.51130.157
0986.0169.65314.7939.538
PWM
ACGT
01-0.6350.28-1.0380.584
02-1.2471.118-0.742-1.729
031.263-3.261-1.041-2.641
041.26-2.693-1.631-1.558
05-3.261-3.2611.336-2.129
06-3.261-2.6931.323-1.96
07-0.7740.273-1.3760.679
08-1.6120.935-1.3980.005
091.028-1.056-0.668-1.067