Model info
| Transcription factor | STAT1 | ||||||||
| Model | STAT1_HUMAN.H10MO.S | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 15 | ||||||||
| Quality | S | ||||||||
| Consensus | vdbTTCYGGGAAdbv | ||||||||
| wAUC | 0.8892643250932145 | ||||||||
| Best AUC | 0.9655611484014607 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 4204 | ||||||||
| TF family | STAT factors{6.2.1} | ||||||||
| TF subfamily | STAT1{6.2.1.0.1} | ||||||||
| HGNC | 11362 | ||||||||
| EntrezGene | 6772 | ||||||||
| UniProt ID | STAT1_HUMAN | ||||||||
| UniProt AC | P42224 | ||||||||
| Comment | Secondary motif. | ||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 628.81 | 1516.155 | 1328.685 | 605.544 |
| 02 | 1606.249 | 640.552 | 1021.542 | 810.852 |
| 03 | 492.204 | 1053.311 | 492.268 | 2041.41 |
| 04 | 20.21 | 66.403 | 45.96 | 3946.621 |
| 05 | 69.866 | 53.348 | 248.047 | 3707.934 |
| 06 | 619.559 | 3311.953 | 50.369 | 97.314 |
| 07 | 206.912 | 2650.217 | 162.373 | 1059.692 |
| 08 | 1973.787 | 0.0 | 2105.408 | 0.0 |
| 09 | 595.207 | 24.93 | 3401.312 | 57.745 |
| 10 | 102.865 | 30.352 | 3691.391 | 254.587 |
| 11 | 3975.184 | 55.535 | 33.911 | 14.564 |
| 12 | 4011.484 | 26.633 | 24.639 | 16.439 |
| 13 | 1993.366 | 436.13 | 932.522 | 717.176 |
| 14 | 650.951 | 873.364 | 821.199 | 1733.681 |
| 15 | 769.975 | 1116.105 | 1663.097 | 530.017 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.482 | 0.396 | 0.264 | -0.52 |
| 02 | 0.454 | -0.464 | 0.002 | -0.229 |
| 03 | -0.726 | 0.032 | -0.726 | 0.693 |
| 04 | -3.825 | -2.703 | -3.057 | 1.352 |
| 05 | -2.654 | -2.914 | -1.407 | 1.289 |
| 06 | -0.497 | 1.177 | -2.97 | -2.33 |
| 07 | -1.587 | 0.954 | -1.827 | 0.038 |
| 08 | 0.659 | -6.198 | 0.724 | -6.198 |
| 09 | -0.537 | -3.633 | 1.203 | -2.838 |
| 10 | -2.276 | -3.45 | 1.285 | -1.382 |
| 11 | 1.359 | -2.876 | -3.346 | -4.117 |
| 12 | 1.368 | -3.572 | -3.644 | -4.011 |
| 13 | 0.669 | -0.847 | -0.089 | -0.351 |
| 14 | -0.448 | -0.155 | -0.216 | 0.53 |
| 15 | -0.28 | 0.09 | 0.488 | -0.653 |