Model info
| Transcription factor | STAT1 | ||||||||
| Model | STAT1_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 22 | ||||||||
| Quality | A | ||||||||
| Consensus | YSvYTTCChRGAARhYhShKbh | ||||||||
| wAUC | 0.899247616650883 | ||||||||
| Best AUC | 0.9471792244403481 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 467 | ||||||||
| TF family | STAT factors{6.2.1} | ||||||||
| TF subfamily | STAT1{6.2.1.0.1} | ||||||||
| HGNC | 11362 | ||||||||
| EntrezGene | 6772 | ||||||||
| UniProt ID | STAT1_HUMAN | ||||||||
| UniProt AC | P42224 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 17.228 | 238.96 | 62.469 | 149.185 |
| 02 | 41.573 | 331.476 | 52.184 | 42.609 |
| 03 | 124.785 | 233.792 | 62.903 | 46.363 |
| 04 | 52.565 | 59.505 | 38.875 | 316.899 |
| 05 | 0.0 | 3.018 | 1.49 | 463.335 |
| 06 | 1.292 | 0.0 | 3.988 | 462.563 |
| 07 | 13.875 | 447.242 | 0.0 | 6.726 |
| 08 | 17.386 | 407.56 | 3.052 | 39.844 |
| 09 | 134.016 | 145.148 | 38.909 | 149.769 |
| 10 | 116.094 | 10.493 | 303.039 | 38.216 |
| 11 | 12.329 | 1.957 | 357.229 | 96.327 |
| 12 | 408.055 | 54.736 | 4.195 | 0.856 |
| 13 | 420.564 | 30.533 | 14.582 | 2.163 |
| 14 | 359.392 | 26.049 | 69.531 | 12.871 |
| 15 | 158.573 | 75.247 | 32.635 | 201.388 |
| 16 | 10.756 | 290.921 | 66.375 | 99.791 |
| 17 | 128.821 | 105.293 | 36.556 | 197.172 |
| 18 | 29.104 | 316.223 | 71.885 | 50.63 |
| 19 | 258.822 | 70.278 | 63.964 | 74.779 |
| 20 | 39.848 | 49.098 | 50.605 | 328.291 |
| 21 | 50.046 | 72.692 | 227.426 | 117.679 |
| 22 | 207.573 | 129.887 | 63.125 | 67.258 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.843 | 0.708 | -0.616 | 0.241 |
| 02 | -1.011 | 1.033 | -0.791 | -0.987 |
| 03 | 0.064 | 0.686 | -0.609 | -0.906 |
| 04 | -0.784 | -0.663 | -1.076 | 0.989 |
| 05 | -4.345 | -3.259 | -3.667 | 1.367 |
| 06 | -3.735 | -4.345 | -3.066 | 1.365 |
| 07 | -2.04 | 1.332 | -4.345 | -2.663 |
| 08 | -1.834 | 1.239 | -3.251 | -1.052 |
| 09 | 0.134 | 0.213 | -1.075 | 0.244 |
| 10 | -0.007 | -2.287 | 0.944 | -1.092 |
| 11 | -2.145 | -3.524 | 1.108 | -0.191 |
| 12 | 1.24 | -0.745 | -3.029 | -3.902 |
| 13 | 1.27 | -1.307 | -1.995 | -3.467 |
| 14 | 1.114 | -1.458 | -0.511 | -2.107 |
| 15 | 0.301 | -0.434 | -1.243 | 0.538 |
| 16 | -2.266 | 0.903 | -0.557 | -0.157 |
| 17 | 0.095 | -0.104 | -1.135 | 0.517 |
| 18 | -1.353 | 0.986 | -0.479 | -0.82 |
| 19 | 0.787 | -0.501 | -0.593 | -0.44 |
| 20 | -1.052 | -0.85 | -0.821 | 1.024 |
| 21 | -0.832 | -0.468 | 0.659 | 0.006 |
| 22 | 0.568 | 0.104 | -0.606 | -0.544 |