STA5B_HUMAN.H10DI.C motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v13

Model info

Transcription factor

STAT5B

Model

STA5B_HUMAN.H10DI.C

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

ChIP-Seq

Model length

14

Quality

C

Consensus

nbTTCYTRGAAdnn

wAUC

0.9217641911407325

Best AUC

0.9217641911407325

Benchmark datasets

1

Aligned words

505

TF family

STAT factors{6.2.1}

TF subfamily

STAT5B{6.2.1.0.6}

HGNC

11367

EntrezGene

6777

UniProt ID

STA5B_HUMAN

UniProt AC

P51692

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	7.0061
0.0005	9.2151
0.0001	13.8681

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	33.359	29.656	36.093	49.376	16.652	29.941	6.963	43.282	14.774	36.949	17.876	61.249	6.897	30.768	20.436	64.728
02	0.0	1.925	1.012	68.745	3.08	1.997	0.0	122.238	0.0	4.817	0.0	76.551	0.997	4.171	0.0	213.467
03	0.0	0.0	1.057	3.02	1.039	0.0	0.0	11.871	0.0	0.0	0.0	1.012	26.915	0.957	2.835	450.294
04	0.884	27.07	0.0	0.0	0.957	0.0	0.0	0.0	0.0	3.891	0.0	0.0	4.083	455.155	0.0	6.959
05	0.0	2.086	0.0	3.839	31.168	140.386	5.986	308.576	0.0	0.0	0.0	0.0	0.0	4.867	0.0	2.091
06	0.0	0.0	26.232	4.936	0.0	0.0	11.687	135.652	0.0	0.0	2.918	3.068	0.0	0.0	201.152	113.355
07	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	161.797	4.033	53.44	22.718	84.931	5.838	150.144	16.099
08	0.0	0.0	240.615	6.113	0.0	0.0	8.948	0.923	4.039	0.988	188.509	10.047	0.0	1.059	37.759	0.0
09	4.039	0.0	0.0	0.0	2.047	0.0	0.0	0.0	416.758	14.62	11.93	32.522	16.054	1.03	0.0	0.0
10	432.093	0.0	5.832	0.973	15.65	0.0	0.0	0.0	11.93	0.0	0.0	0.0	30.689	0.0	1.833	0.0
11	208.816	87.21	100.463	93.873	0.0	0.0	0.0	0.0	0.902	1.826	2.993	1.944	0.0	0.0	0.0	0.973
12	53.182	50.671	33.537	72.329	19.87	21.52	3.793	43.854	24.654	31.753	20.884	26.164	9.123	22.267	27.158	38.242
13	32.231	19.819	44.71	10.069	38.335	45.711	3.886	38.279	23.133	29.324	22.019	10.896	30.416	37.852	71.981	40.34

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	0.067	-0.05	0.144	0.455	-0.617	-0.04	-1.457	0.324	-0.734	0.168	-0.547	0.669	-1.466	-0.013	-0.416	0.724
02	-4.398	-2.614	-3.116	0.784	-2.209	-2.583	-4.398	1.357	-4.398	-1.803	-4.398	0.891	-3.127	-1.935	-4.398	1.913
03	-4.398	-4.398	-3.084	-2.226	-3.097	-4.398	-4.398	-0.946	-4.398	-4.398	-4.398	-3.116	-0.145	-3.156	-2.282	2.658
04	-3.211	-0.14	-4.398	-4.398	-3.156	-4.398	-4.398	-4.398	-4.398	-1.999	-4.398	-4.398	-1.955	2.669	-4.398	-1.458
05	-4.398	-2.546	-4.398	-2.011	-0.001	1.495	-1.6	2.281	-4.398	-4.398	-4.398	-4.398	-4.398	-1.793	-4.398	-2.544
06	-4.398	-4.398	-0.171	-1.78	-4.398	-4.398	-0.961	1.461	-4.398	-4.398	-2.257	-2.212	-4.398	-4.398	1.854	1.282
07	-4.398	-4.398	-4.398	-4.398	-4.398	-4.398	-4.398	-4.398	1.636	-1.966	0.533	-0.312	0.994	-1.624	1.562	-0.65
08	-4.398	-4.398	2.032	-1.58	-4.398	-4.398	-1.218	-3.181	-1.965	-3.133	1.789	-1.107	-4.398	-3.083	0.189	-4.398
09	-1.965	-4.398	-4.398	-4.398	-2.562	-4.398	-4.398	-4.398	2.581	-0.744	-0.941	0.041	-0.653	-3.103	-4.398	-4.398
10	2.617	-4.398	-1.625	-3.144	-0.677	-4.398	-4.398	-4.398	-0.941	-4.398	-4.398	-4.398	-0.016	-4.398	-2.654	-4.398
11	1.891	1.02	1.161	1.094	-4.398	-4.398	-4.398	-4.398	-3.197	-2.658	-2.234	-2.606	-4.398	-4.398	-4.398	-3.144
12	0.529	0.481	0.072	0.834	-0.444	-0.366	-2.022	0.337	-0.232	0.018	-0.395	-0.173	-1.2	-0.332	-0.137	0.202
13	0.033	-0.446	0.356	-1.105	0.204	0.378	-2.0	0.203	-0.294	-0.061	-0.343	-1.029	-0.025	0.192	0.829	0.255