Model info
| Transcription factor | Stat5a | ||||||||
| Model | STA5A_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Consensus | ddTTCYTRGAAdh | ||||||||
| wAUC | 0.9165148421625577 | ||||||||
| Best AUC | 0.9596678321611117 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors{6.2.1} | ||||||||
| TF subfamily | STAT5A{6.2.1.0.5} | ||||||||
| MGI | 103036 | ||||||||
| EntrezGene | 20850 | ||||||||
| UniProt ID | STA5A_MOUSE | ||||||||
| UniProt AC | P42230 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 200.327 | 59.714 | 81.82 | 158.139 |
| 02 | 123.422 | 49.406 | 95.309 | 231.862 |
| 03 | 0.0 | 1.871 | 0.0 | 498.129 |
| 04 | 16.99 | 12.367 | 2.759 | 467.884 |
| 05 | 0.85 | 496.483 | 0.0 | 2.668 |
| 06 | 15.438 | 188.34 | 1.712 | 294.51 |
| 07 | 0.0 | 0.0 | 185.614 | 314.386 |
| 08 | 194.116 | 0.0 | 287.986 | 17.898 |
| 09 | 0.0 | 1.062 | 494.352 | 4.586 |
| 10 | 469.827 | 7.05 | 1.89 | 21.233 |
| 11 | 497.081 | 2.018 | 0.0 | 0.901 |
| 12 | 227.19 | 74.421 | 75.038 | 123.351 |
| 13 | 129.067 | 95.488 | 55.742 | 219.703 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.467 | -0.725 | -0.417 | 0.233 |
| 02 | -0.013 | -0.91 | -0.267 | 0.612 |
| 03 | -4.4 | -3.61 | -4.4 | 1.373 |
| 04 | -1.921 | -2.207 | -3.379 | 1.311 |
| 05 | -3.964 | 1.37 | -4.4 | -3.401 |
| 06 | -2.008 | 0.406 | -3.657 | 0.85 |
| 07 | -4.4 | -4.4 | 0.391 | 0.915 |
| 08 | 0.436 | -4.4 | 0.828 | -1.873 |
| 09 | -4.4 | -3.879 | 1.366 | -3.026 |
| 10 | 1.315 | -2.688 | -3.604 | -1.714 |
| 11 | 1.371 | -3.568 | -4.4 | -3.943 |
| 12 | 0.592 | -0.51 | -0.502 | -0.013 |
| 13 | 0.032 | -0.266 | -0.792 | 0.559 |