STA5A_HUMAN.H10DI.B motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

STAT5A

Model

STA5A_HUMAN.H10DI.B

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

ChIP-Seq

Model length

15

Quality

B

Consensus

nnbTTCYGRGAAdnn

wAUC

0.835154785981265

Best AUC

0.9047646436786899

Benchmark datasets

2

Aligned words

498

TF family

STAT factors{6.2.1}

TF subfamily

STAT5A{6.2.1.0.5}

HGNC

11366

EntrezGene

6776

UniProt ID

STA5A_HUMAN

UniProt AC

P42229

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	7.2191
0.0005	9.3391
0.0001	13.8551

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	30.667	12.831	47.332	8.852	68.351	20.912	19.704	58.509	25.679	24.75	32.928	22.14	25.475	15.921	46.713	31.979
02	21.198	29.792	33.955	65.226	10.463	22.977	4.864	36.109	24.089	45.968	15.646	60.975	8.784	30.245	12.523	69.929
03	0.0	2.09	0.0	62.444	1.889	4.056	0.888	122.149	0.0	0.951	0.994	65.044	0.0	5.677	0.0	226.561
04	0.0	0.0	0.0	1.889	0.992	0.0	0.0	11.781	0.0	0.0	0.0	1.882	21.711	0.926	4.844	448.718
05	0.0	22.703	0.0	0.0	0.0	0.926	0.0	0.0	0.0	4.844	0.0	0.0	6.041	452.084	1.008	5.138
06	2.065	3.053	0.0	0.923	30.783	151.487	13.231	285.056	0.0	0.0	1.008	0.0	0.0	2.941	1.053	1.144
07	0.0	0.0	23.601	9.247	0.0	0.0	26.33	131.151	0.0	0.0	7.017	8.275	0.0	0.0	195.68	91.443
08	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	166.156	5.079	60.907	20.485	71.529	3.063	153.852	11.671
09	1.954	1.859	225.929	7.944	1.802	0.0	6.34	0.0	0.0	1.921	204.875	7.963	0.0	0.0	32.156	0.0
10	1.954	0.913	0.888	0.0	1.947	0.929	0.0	0.903	413.291	16.132	3.302	36.576	13.789	2.118	0.0	0.0
11	413.036	1.048	14.692	2.206	20.093	0.0	0.0	0.0	3.131	0.0	1.059	0.0	31.68	3.876	0.998	0.924
12	194.347	60.076	98.094	115.422	0.0	0.0	2.966	1.958	6.99	3.826	1.028	4.905	0.0	0.0	1.893	1.238
13	55.485	48.4	33.258	64.193	13.473	16.744	0.947	32.739	29.741	30.948	14.777	28.515	11.869	32.908	33.328	45.418
14	25.76	19.977	45.678	19.152	43.791	33.089	6.106	46.014	20.573	33.933	19.985	7.818	19.089	45.193	64.962	41.621

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	-0.004	-0.858	0.425	-1.216	0.79	-0.381	-0.44	0.636	-0.179	-0.216	0.066	-0.325	-0.187	-0.648	0.412	0.037
02	-0.368	-0.033	0.096	0.744	-1.056	-0.289	-1.781	0.157	-0.242	0.396	-0.665	0.677	-1.224	-0.018	-0.882	0.813
03	-4.388	-2.533	-4.388	0.701	-2.617	-1.949	-3.196	1.369	-4.388	-3.148	-3.117	0.741	-4.388	-1.637	-4.388	1.985
04	-4.388	-4.388	-4.388	-2.617	-3.118	-4.388	-4.388	-0.941	-4.388	-4.388	-4.388	-2.62	-0.344	-3.168	-1.785	2.667
05	-4.388	-0.301	-4.388	-4.388	-4.388	-3.168	-4.388	-4.388	-4.388	-1.785	-4.388	-4.388	-1.579	2.675	-3.107	-1.731
06	-2.543	-2.204	-4.388	-3.17	-0.0	1.583	-0.829	2.214	-4.388	-4.388	-3.107	-4.388	-4.388	-2.237	-3.075	-3.013
07	-4.388	-4.388	-0.262	-1.175	-4.388	-4.388	-0.155	1.439	-4.388	-4.388	-1.438	-1.281	-4.388	-4.388	1.839	1.08
08	-4.388	-4.388	-4.388	-4.388	-4.388	-4.388	-4.388	-4.388	1.675	-1.741	0.676	-0.401	0.836	-2.201	1.599	-0.95
09	-2.589	-2.63	1.982	-1.32	-2.656	-4.388	-1.534	-4.388	-4.388	-2.603	1.884	-1.318	-4.388	-4.388	0.043	-4.388
10	-2.589	-3.177	-3.196	-4.388	-2.592	-3.165	-4.388	-3.185	2.585	-0.635	-2.134	0.17	-0.788	-2.521	-4.388	-4.388
11	2.585	-3.079	-0.727	-2.487	-0.42	-4.388	-4.388	-4.388	-2.182	-4.388	-3.071	-4.388	0.028	-1.99	-3.114	-3.169
12	1.832	0.662	1.15	1.312	-4.388	-4.388	-2.23	-2.587	-1.442	-2.002	-3.093	-1.774	-4.388	-4.388	-2.616	-2.954
13	0.583	0.448	0.076	0.728	-0.811	-0.599	-3.152	0.06	-0.034	0.005	-0.721	-0.076	-0.934	0.066	0.078	0.385
14	-0.176	-0.426	0.39	-0.467	0.348	0.071	-1.569	0.397	-0.397	0.096	-0.426	-1.335	-0.471	0.38	0.74	0.298