Model info
Transcription factorSrebf1
ModelSRBP1_MOUSE.H10MO.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length11
Quality
B
ConsensusvRTSRSSWGWb
wAUC
Best AUC
Benchmark datasets
Aligned words2191
TF familybHLH-ZIP factors{1.2.6}
TF subfamilySREBP factors{1.2.6.3}
MGI107606
EntrezGene20787
UniProt IDSRBP1_MOUSE
UniProt ACQ9WTN3
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9781
0.0005 5.7261
0.0001 7.2045
PCM
ACGT
01428.377462.09989.497289.741
02502.441461.5531167.93237.778
0346.24120.64754.0111948.806
04143.263538.7831374.386113.272
05605.5696.8471440.052117.236
06145.802591.3281242.838189.736
0784.199681.6681397.5486.29
08212.667176.748108.0781672.21
096.85851.5142096.53314.799
101719.64760.749113.335275.972
1173.036505.389932.93658.349
PWM
ACGT
01-0.235-0.160.6-0.624
02-0.076-0.1610.765-2.618
03-2.425-1.491-2.2751.276
04-1.322-0.0070.928-1.553
050.11-4.1290.974-1.519
06-1.3040.0860.827-1.044
07-1.8440.2280.944-4.194
08-0.931-1.114-1.5991.123
09-4.127-2.3211.349-3.483
101.151-2.162-1.552-0.672
11-1.983-0.070.5410.193