Transcription factor | Srebf1 | ||||||||
Model | SRBP1_MOUSE.H10MO.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 11 | ||||||||
Quality | B | ||||||||
Consensus | vRTSRSSWGWb | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 2191 | ||||||||
TF family | bHLH-ZIP factors{1.2.6} | ||||||||
TF subfamily | SREBP factors{1.2.6.3} | ||||||||
MGI | 107606 | ||||||||
EntrezGene | 20787 | ||||||||
UniProt ID | SRBP1_MOUSE | ||||||||
UniProt AC | Q9WTN3 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 428.377 | 462.09 | 989.497 | 289.741 |
02 | 502.441 | 461.553 | 1167.932 | 37.778 |
03 | 46.24 | 120.647 | 54.011 | 1948.806 |
04 | 143.263 | 538.783 | 1374.386 | 113.272 |
05 | 605.569 | 6.847 | 1440.052 | 117.236 |
06 | 145.802 | 591.328 | 1242.838 | 189.736 |
07 | 84.199 | 681.668 | 1397.548 | 6.29 |
08 | 212.667 | 176.748 | 108.078 | 1672.21 |
09 | 6.858 | 51.514 | 2096.533 | 14.799 |
10 | 1719.647 | 60.749 | 113.335 | 275.972 |
11 | 73.036 | 505.389 | 932.93 | 658.349 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.235 | -0.16 | 0.6 | -0.624 |
02 | -0.076 | -0.161 | 0.765 | -2.618 |
03 | -2.425 | -1.491 | -2.275 | 1.276 |
04 | -1.322 | -0.007 | 0.928 | -1.553 |
05 | 0.11 | -4.129 | 0.974 | -1.519 |
06 | -1.304 | 0.086 | 0.827 | -1.044 |
07 | -1.844 | 0.228 | 0.944 | -4.194 |
08 | -0.931 | -1.114 | -1.599 | 1.123 |
09 | -4.127 | -2.321 | 1.349 | -3.483 |
10 | 1.151 | -2.162 | -1.552 | -0.672 |
11 | -1.983 | -0.07 | 0.541 | 0.193 |