Model info
| Transcription factor | Spi1 | ||||||||
| Model | SPI1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 16 | ||||||||
| Quality | A | ||||||||
| Consensus | dvWAWKRGGAARTGvv | ||||||||
| wAUC | 0.9546360121380553 | ||||||||
| Best AUC | 0.982990458166321 | ||||||||
| Benchmark datasets | 7 | ||||||||
| Aligned words | 493 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Spi-like factors{3.5.2.5} | ||||||||
| MGI | 98282 | ||||||||
| EntrezGene | 20375 | ||||||||
| UniProt ID | SPI1_MOUSE | ||||||||
| UniProt AC | P17433 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 263.456 | 66.94 | 92.771 | 69.301 |
| 02 | 266.569 | 46.096 | 143.396 | 36.407 |
| 03 | 389.633 | 17.572 | 38.558 | 46.705 |
| 04 | 390.509 | 8.598 | 66.628 | 26.733 |
| 05 | 357.729 | 1.915 | 38.464 | 94.359 |
| 06 | 39.248 | 24.042 | 357.957 | 71.221 |
| 07 | 307.528 | 27.795 | 153.932 | 3.213 |
| 08 | 92.266 | 0.0 | 400.202 | 0.0 |
| 09 | 0.0 | 0.0 | 492.468 | 0.0 |
| 10 | 488.281 | 1.953 | 2.234 | 0.0 |
| 11 | 492.468 | 0.0 | 0.0 | 0.0 |
| 12 | 82.067 | 48.497 | 360.674 | 1.23 |
| 13 | 13.344 | 7.592 | 11.53 | 460.002 |
| 14 | 10.941 | 52.201 | 428.381 | 0.944 |
| 15 | 134.329 | 172.029 | 139.482 | 46.628 |
| 16 | 195.145 | 89.464 | 121.174 | 86.685 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.754 | -0.599 | -0.279 | -0.565 |
| 02 | 0.766 | -0.962 | 0.151 | -1.189 |
| 03 | 1.144 | -1.875 | -1.134 | -0.949 |
| 04 | 1.146 | -2.508 | -0.604 | -1.483 |
| 05 | 1.058 | -3.583 | -1.136 | -0.262 |
| 06 | -1.117 | -1.583 | 1.059 | -0.538 |
| 07 | 0.908 | -1.447 | 0.221 | -3.265 |
| 08 | -0.284 | -4.387 | 1.17 | -4.387 |
| 09 | -4.387 | -4.387 | 1.377 | -4.387 |
| 10 | 1.368 | -3.572 | -3.495 | -4.387 |
| 11 | 1.377 | -4.387 | -4.387 | -4.387 |
| 12 | -0.399 | -0.913 | 1.067 | -3.803 |
| 13 | -2.125 | -2.613 | -2.255 | 1.309 |
| 14 | -2.301 | -0.841 | 1.238 | -3.912 |
| 15 | 0.086 | 0.331 | 0.123 | -0.951 |
| 16 | 0.456 | -0.315 | -0.016 | -0.346 |