Model info
| Transcription factor | SPI1 | ||||||||
| Model | SPI1_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 17 | ||||||||
| Quality | A | ||||||||
| Consensus | vRRAWGRGGAASTGRdR | ||||||||
| wAUC | 0.9810708737528159 | ||||||||
| Best AUC | 0.989616988206166 | ||||||||
| Benchmark datasets | 9 | ||||||||
| Aligned words | 451 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Spi-like factors{3.5.2.5} | ||||||||
| HGNC | 11241 | ||||||||
| EntrezGene | 6688 | ||||||||
| UniProt ID | SPI1_HUMAN | ||||||||
| UniProt AC | P17947 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 182.531 | 78.208 | 117.048 | 75.364 |
| 02 | 232.921 | 40.625 | 150.446 | 29.159 |
| 03 | 347.721 | 18.058 | 45.603 | 41.768 |
| 04 | 367.481 | 6.776 | 43.261 | 35.632 |
| 05 | 329.798 | 3.612 | 26.566 | 93.174 |
| 06 | 55.312 | 16.529 | 373.579 | 7.731 |
| 07 | 288.835 | 30.5 | 131.875 | 1.94 |
| 08 | 42.581 | 0.886 | 409.683 | 0.0 |
| 09 | 0.0 | 0.0 | 453.15 | 0.0 |
| 10 | 453.15 | 0.0 | 0.0 | 0.0 |
| 11 | 449.048 | 0.0 | 0.0 | 4.102 |
| 12 | 9.465 | 133.97 | 309.715 | 0.0 |
| 13 | 9.43 | 10.271 | 7.216 | 426.233 |
| 14 | 1.043 | 14.984 | 437.122 | 0.0 |
| 15 | 301.954 | 34.413 | 105.051 | 11.732 |
| 16 | 221.097 | 33.787 | 152.978 | 45.289 |
| 17 | 295.426 | 49.715 | 57.586 | 50.422 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.472 | -0.365 | 0.032 | -0.401 |
| 02 | 0.714 | -1.002 | 0.28 | -1.319 |
| 03 | 1.112 | -1.768 | -0.89 | -0.975 |
| 04 | 1.167 | -2.627 | -0.941 | -1.128 |
| 05 | 1.06 | -3.106 | -1.408 | -0.193 |
| 06 | -0.703 | -1.85 | 1.184 | -2.518 |
| 07 | 0.928 | -1.277 | 0.15 | -3.499 |
| 08 | -0.957 | -3.862 | 1.276 | -4.319 |
| 09 | -4.319 | -4.319 | 1.376 | -4.319 |
| 10 | 1.376 | -4.319 | -4.319 | -4.319 |
| 11 | 1.367 | -4.319 | -4.319 | -3.015 |
| 12 | -2.346 | 0.166 | 0.997 | -4.319 |
| 13 | -2.349 | -2.275 | -2.575 | 1.315 |
| 14 | -3.799 | -1.939 | 1.34 | -4.319 |
| 15 | 0.972 | -1.161 | -0.074 | -2.159 |
| 16 | 0.662 | -1.179 | 0.297 | -0.897 |
| 17 | 0.95 | -0.807 | -0.664 | -0.793 |