Model info
| Transcription factor | SP4 | ||||||||
| Model | SP4_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 22 | ||||||||
| Quality | D | ||||||||
| Consensus | RKGGGCGGRGSSdSSvbSvvSv | ||||||||
| wAUC | 0.7801088292884774 | ||||||||
| Best AUC | 0.7801088292884774 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 524 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Sp1-like factors{2.3.1.1} | ||||||||
| HGNC | 11209 | ||||||||
| EntrezGene | 6671 | ||||||||
| UniProt ID | SP4_HUMAN | ||||||||
| UniProt AC | Q02446 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 89.121 | 57.639 | 336.403 | 12.092 |
| 02 | 52.427 | 24.875 | 364.897 | 53.056 |
| 03 | 60.578 | 41.283 | 389.034 | 4.36 |
| 04 | 12.241 | 25.104 | 448.309 | 9.601 |
| 05 | 12.439 | 7.549 | 471.965 | 3.302 |
| 06 | 32.342 | 435.537 | 7.894 | 19.483 |
| 07 | 3.853 | 18.218 | 461.051 | 12.132 |
| 08 | 20.109 | 31.066 | 403.327 | 40.752 |
| 09 | 63.907 | 23.235 | 379.481 | 28.631 |
| 10 | 33.836 | 32.552 | 414.665 | 14.202 |
| 11 | 43.315 | 363.197 | 65.919 | 22.824 |
| 12 | 39.353 | 325.755 | 82.66 | 47.486 |
| 13 | 100.006 | 71.026 | 205.31 | 118.913 |
| 14 | 25.199 | 87.374 | 355.381 | 27.302 |
| 15 | 60.49 | 111.972 | 302.295 | 20.499 |
| 16 | 74.739 | 123.953 | 259.762 | 36.801 |
| 17 | 40.283 | 169.306 | 243.313 | 42.353 |
| 18 | 40.011 | 154.75 | 263.529 | 36.965 |
| 19 | 81.65 | 104.489 | 275.615 | 33.501 |
| 20 | 84.742 | 105.946 | 256.818 | 47.749 |
| 21 | 45.41 | 99.577 | 320.866 | 29.403 |
| 22 | 57.739 | 161.969 | 235.61 | 39.936 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.324 | -0.75 | 0.992 | -2.218 |
| 02 | -0.843 | -1.557 | 1.073 | -0.831 |
| 03 | -0.702 | -1.074 | 1.136 | -3.054 |
| 04 | -2.207 | -1.548 | 1.278 | -2.42 |
| 05 | -2.193 | -2.623 | 1.329 | -3.252 |
| 06 | -1.308 | 1.249 | -2.586 | -1.785 |
| 07 | -3.144 | -1.847 | 1.306 | -2.215 |
| 08 | -1.756 | -1.346 | 1.172 | -1.086 |
| 09 | -0.65 | -1.621 | 1.112 | -1.424 |
| 10 | -1.265 | -1.302 | 1.2 | -2.074 |
| 11 | -1.028 | 1.068 | -0.62 | -1.638 |
| 12 | -1.12 | 0.96 | -0.398 | -0.939 |
| 13 | -0.211 | -0.547 | 0.501 | -0.04 |
| 14 | -1.545 | -0.343 | 1.046 | -1.469 |
| 15 | -0.703 | -0.099 | 0.885 | -1.738 |
| 16 | -0.497 | 0.001 | 0.734 | -1.184 |
| 17 | -1.098 | 0.31 | 0.669 | -1.049 |
| 18 | -1.104 | 0.221 | 0.749 | -1.18 |
| 19 | -0.41 | -0.167 | 0.793 | -1.274 |
| 20 | -0.373 | -0.154 | 0.723 | -0.933 |
| 21 | -0.982 | -0.215 | 0.945 | -1.399 |
| 22 | -0.749 | 0.266 | 0.638 | -1.106 |