Transcription factor | Sp3 | ||||||||
Model | SP3_MOUSE.H10MO.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 20 | ||||||||
Quality | B | ||||||||
Consensus | vvvvvKGGGMGGRSvbdvvv | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 415 | ||||||||
TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
TF subfamily | Sp1-like factors{2.3.1.1} | ||||||||
MGI | 1277166 | ||||||||
EntrezGene | 20687 | ||||||||
UniProt ID | SP3_MOUSE | ||||||||
UniProt AC | O70494 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 86.181 | 93.995 | 173.768 | 61.174 |
02 | 72.896 | 90.651 | 197.118 | 54.453 |
03 | 94.652 | 91.338 | 182.239 | 46.888 |
04 | 114.657 | 91.026 | 161.608 | 47.826 |
05 | 71.333 | 82.898 | 230.253 | 30.634 |
06 | 50.139 | 31.134 | 264.95 | 68.894 |
07 | 57.516 | 1.0 | 354.85 | 1.75 |
08 | 1.0 | 4.251 | 405.74 | 4.126 |
09 | 4.001 | 8.127 | 401.113 | 1.876 |
10 | 97.34 | 260.511 | 21.006 | 36.26 |
11 | 18.443 | 14.254 | 369.542 | 12.879 |
12 | 3.001 | 6.127 | 361.852 | 44.137 |
13 | 78.647 | 14.504 | 298.584 | 23.382 |
14 | 39.511 | 55.266 | 304.961 | 15.379 |
15 | 47.388 | 229.94 | 99.278 | 38.511 |
16 | 46.513 | 152.418 | 130.975 | 85.212 |
17 | 106.905 | 55.203 | 186.74 | 66.269 |
18 | 83.274 | 69.52 | 214.123 | 48.201 |
19 | 68.019 | 110.031 | 189.116 | 47.951 |
20 | 75.584 | 100.403 | 186.74 | 52.39 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.183 | -0.098 | 0.51 | -0.519 |
02 | -0.347 | -0.133 | 0.635 | -0.632 |
03 | -0.091 | -0.126 | 0.557 | -0.777 |
04 | 0.098 | -0.129 | 0.438 | -0.758 |
05 | -0.368 | -0.221 | 0.789 | -1.187 |
06 | -0.712 | -1.171 | 0.929 | -0.402 |
07 | -0.579 | -3.737 | 1.219 | -3.476 |
08 | -3.737 | -2.906 | 1.353 | -2.928 |
09 | -2.95 | -2.391 | 1.341 | -3.438 |
10 | -0.063 | 0.912 | -1.543 | -1.025 |
11 | -1.663 | -1.899 | 1.26 | -1.99 |
12 | -3.151 | -2.624 | 1.239 | -0.836 |
13 | -0.273 | -1.883 | 1.047 | -1.442 |
14 | -0.943 | -0.618 | 1.068 | -1.83 |
15 | -0.767 | 0.788 | -0.044 | -0.967 |
16 | -0.785 | 0.38 | 0.23 | -0.194 |
17 | 0.029 | -0.619 | 0.581 | -0.44 |
18 | -0.217 | -0.394 | 0.717 | -0.751 |
19 | -0.415 | 0.058 | 0.594 | -0.756 |
20 | -0.312 | -0.033 | 0.581 | -0.67 |