Model info
| Transcription factor | SP3 | ||||||||
| Model | SP3_HUMAN.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 20 | ||||||||
| Quality | B | ||||||||
| Consensus | vvvvvKGGGMGGRSvbdvvv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 415 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Sp1-like factors{2.3.1.1} | ||||||||
| HGNC | 11208 | ||||||||
| EntrezGene | 6670 | ||||||||
| UniProt ID | SP3_HUMAN | ||||||||
| UniProt AC | Q02447 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 86.181 | 93.995 | 173.768 | 61.174 |
| 02 | 72.896 | 90.651 | 197.118 | 54.453 |
| 03 | 94.652 | 91.338 | 182.239 | 46.888 |
| 04 | 114.657 | 91.026 | 161.608 | 47.826 |
| 05 | 71.333 | 82.898 | 230.253 | 30.634 |
| 06 | 50.139 | 31.134 | 264.95 | 68.894 |
| 07 | 57.516 | 1.0 | 354.85 | 1.75 |
| 08 | 1.0 | 4.251 | 405.74 | 4.126 |
| 09 | 4.001 | 8.127 | 401.113 | 1.876 |
| 10 | 97.34 | 260.511 | 21.006 | 36.26 |
| 11 | 18.443 | 14.254 | 369.542 | 12.879 |
| 12 | 3.001 | 6.127 | 361.852 | 44.137 |
| 13 | 78.647 | 14.504 | 298.584 | 23.382 |
| 14 | 39.511 | 55.266 | 304.961 | 15.379 |
| 15 | 47.388 | 229.94 | 99.278 | 38.511 |
| 16 | 46.513 | 152.418 | 130.975 | 85.212 |
| 17 | 106.905 | 55.203 | 186.74 | 66.269 |
| 18 | 83.274 | 69.52 | 214.123 | 48.201 |
| 19 | 68.019 | 110.031 | 189.116 | 47.951 |
| 20 | 75.584 | 100.403 | 186.74 | 52.39 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.183 | -0.098 | 0.51 | -0.519 |
| 02 | -0.347 | -0.133 | 0.635 | -0.632 |
| 03 | -0.091 | -0.126 | 0.557 | -0.777 |
| 04 | 0.098 | -0.129 | 0.438 | -0.758 |
| 05 | -0.368 | -0.221 | 0.789 | -1.187 |
| 06 | -0.712 | -1.171 | 0.929 | -0.402 |
| 07 | -0.579 | -3.737 | 1.219 | -3.476 |
| 08 | -3.737 | -2.906 | 1.353 | -2.928 |
| 09 | -2.95 | -2.391 | 1.341 | -3.438 |
| 10 | -0.063 | 0.912 | -1.543 | -1.025 |
| 11 | -1.663 | -1.899 | 1.26 | -1.99 |
| 12 | -3.151 | -2.624 | 1.239 | -0.836 |
| 13 | -0.273 | -1.883 | 1.047 | -1.442 |
| 14 | -0.943 | -0.618 | 1.068 | -1.83 |
| 15 | -0.767 | 0.788 | -0.044 | -0.967 |
| 16 | -0.785 | 0.38 | 0.23 | -0.194 |
| 17 | 0.029 | -0.619 | 0.581 | -0.44 |
| 18 | -0.217 | -0.394 | 0.717 | -0.751 |
| 19 | -0.415 | 0.058 | 0.594 | -0.756 |
| 20 | -0.312 | -0.033 | 0.581 | -0.67 |