Model info
| Transcription factor | Sp2 | ||||||||
| Model | SP2_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 17 | ||||||||
| Quality | C | ||||||||
| Consensus | ddRKRRGGSGKRRbbRv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 31 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Sp1-like factors{2.3.1.1} | ||||||||
| MGI | 1926162 | ||||||||
| EntrezGene | 78912 | ||||||||
| UniProt ID | SP2_MOUSE | ||||||||
| UniProt AC | Q9D2H6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.179 | 5.022 | 12.627 | 6.157 |
| 02 | 12.712 | 3.632 | 9.647 | 4.994 |
| 03 | 6.81 | 0.908 | 17.252 | 6.015 |
| 04 | 1.816 | 0.908 | 15.322 | 12.939 |
| 05 | 5.902 | 3.859 | 18.273 | 2.951 |
| 06 | 6.923 | 3.064 | 20.997 | 0.0 |
| 07 | 0.0 | 0.0 | 30.985 | 0.0 |
| 08 | 0.0 | 4.086 | 26.899 | 0.0 |
| 09 | 2.837 | 19.181 | 8.966 | 0.0 |
| 10 | 2.043 | 2.043 | 26.899 | 0.0 |
| 11 | 0.0 | 3.859 | 22.359 | 4.767 |
| 12 | 13.733 | 0.0 | 15.322 | 1.929 |
| 13 | 11.236 | 5.107 | 14.641 | 0.0 |
| 14 | 4.88 | 13.62 | 6.356 | 6.129 |
| 15 | 2.951 | 6.356 | 6.469 | 15.209 |
| 16 | 19.862 | 1.816 | 7.264 | 2.043 |
| 17 | 16.344 | 4.767 | 5.788 | 4.086 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.068 | -0.381 | 0.449 | -0.204 |
| 02 | 0.456 | -0.65 | 0.2 | -0.385 |
| 03 | -0.115 | -1.583 | 0.744 | -0.225 |
| 04 | -1.169 | -1.583 | 0.632 | 0.472 |
| 05 | -0.241 | -0.601 | 0.799 | -0.815 |
| 06 | -0.101 | -0.785 | 0.932 | -2.305 |
| 07 | -2.305 | -2.305 | 1.309 | -2.305 |
| 08 | -2.305 | -0.554 | 1.171 | -2.305 |
| 09 | -0.845 | 0.845 | 0.133 | -2.305 |
| 10 | -1.087 | -1.087 | 1.171 | -2.305 |
| 11 | -2.305 | -0.601 | 0.993 | -0.425 |
| 12 | 0.528 | -2.305 | 0.632 | -1.127 |
| 13 | 0.34 | -0.366 | 0.589 | -2.305 |
| 14 | -0.405 | 0.52 | -0.176 | -0.208 |
| 15 | -0.815 | -0.176 | -0.161 | 0.624 |
| 16 | 0.879 | -1.169 | -0.058 | -1.087 |
| 17 | 0.693 | -0.425 | -0.258 | -0.554 |