Model info
| Transcription factor | Runx3 | ||||||||
| Model | RUNX3_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | B | ||||||||
| Consensus | bKKKKTTTGYGGTb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 284 | ||||||||
| TF family | Runt-related factors{6.4.1} | ||||||||
| TF subfamily | Runx3 (PEBP2alphaC, CBF-alpha3, AML-2){6.4.1.0.3} | ||||||||
| MGI | 102672 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | RUNX3_MOUSE | ||||||||
| UniProt AC | Q64131 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 21.854 | 43.245 | 75.536 | 77.701 |
| 02 | 4.608 | 16.332 | 150.761 | 46.635 |
| 03 | 1.751 | 37.425 | 121.831 | 57.329 |
| 04 | 1.168 | 5.775 | 143.928 | 67.466 |
| 05 | 5.56 | 5.928 | 103.601 | 103.248 |
| 06 | 17.471 | 4.961 | 17.909 | 177.995 |
| 07 | 11.391 | 17.125 | 13.78 | 176.041 |
| 08 | 8.041 | 1.904 | 3.031 | 205.36 |
| 09 | 0.737 | 0.584 | 215.112 | 1.904 |
| 10 | 1.904 | 84.103 | 10.187 | 122.142 |
| 11 | 0.0 | 0.0 | 218.336 | 0.0 |
| 12 | 0.0 | 0.0 | 217.753 | 0.584 |
| 13 | 1.168 | 3.808 | 9.021 | 204.339 |
| 14 | 28.494 | 33.573 | 35.026 | 121.243 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.88 | -0.227 | 0.318 | 0.346 |
| 02 | -2.24 | -1.152 | 1.0 | -0.153 |
| 03 | -2.893 | -0.366 | 0.79 | 0.048 |
| 04 | -3.102 | -2.061 | 0.955 | 0.207 |
| 05 | -2.092 | -2.04 | 0.629 | 0.626 |
| 06 | -1.089 | -2.182 | -1.066 | 1.165 |
| 07 | -1.48 | -1.108 | -1.308 | 1.154 |
| 08 | -1.785 | -2.845 | -2.548 | 1.307 |
| 09 | -3.29 | -3.366 | 1.353 | -2.845 |
| 10 | -2.845 | 0.424 | -1.579 | 0.792 |
| 11 | -3.727 | -3.727 | 1.368 | -3.727 |
| 12 | -3.727 | -3.727 | 1.365 | -3.366 |
| 13 | -3.102 | -2.384 | -1.685 | 1.302 |
| 14 | -0.628 | -0.471 | -0.43 | 0.785 |