Transcription factor | RFX3 | ||||||||
Model | RFX3_HUMAN.H10MO.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 14 | ||||||||
Quality | B | ||||||||
Consensus | bGTTRCCATGGhRn | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 772 | ||||||||
TF family | RFX-related factors{3.3.3} | ||||||||
TF subfamily | RFX3{3.3.3.0.3} | ||||||||
HGNC | 9984 | ||||||||
EntrezGene | 5991 | ||||||||
UniProt ID | RFX3_HUMAN | ||||||||
UniProt AC | P48380 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 73.555 | 198.684 | 229.985 | 152.439 |
02 | 0.0 | 0.0 | 654.663 | 0.0 |
03 | 0.0 | 0.0 | 0.0 | 654.663 |
04 | 45.819 | 5.85 | 0.0 | 602.993 |
05 | 218.097 | 2.925 | 399.72 | 33.921 |
06 | 0.0 | 583.854 | 0.0 | 70.809 |
07 | 0.0 | 517.149 | 0.0 | 137.514 |
08 | 653.774 | 0.0 | 0.444 | 0.444 |
09 | 4.442 | 0.0 | 36.092 | 614.128 |
10 | 68.965 | 0.0 | 585.698 | 0.0 |
11 | 44.194 | 0.888 | 609.58 | 0.0 |
12 | 78.842 | 182.785 | 47.793 | 345.242 |
13 | 384.233 | 0.444 | 196.891 | 73.094 |
14 | 363.644 | 96.179 | 96.179 | 98.66 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.788 | 0.192 | 0.337 | -0.07 |
02 | -4.625 | -4.625 | 1.379 | -4.625 |
03 | -4.625 | -4.625 | -4.625 | 1.379 |
04 | -1.248 | -3.097 | -4.625 | 1.297 |
05 | 0.285 | -3.593 | 0.887 | -1.537 |
06 | -4.625 | 1.265 | -4.625 | -0.825 |
07 | -4.625 | 1.144 | -4.625 | -0.172 |
08 | 1.378 | -4.625 | -4.382 | -4.382 |
09 | -3.305 | -4.625 | -1.478 | 1.315 |
10 | -0.851 | -4.625 | 1.268 | -4.625 |
11 | -1.283 | -4.188 | 1.308 | -4.625 |
12 | -0.72 | 0.109 | -1.207 | 0.741 |
13 | 0.848 | -4.382 | 0.183 | -0.794 |
14 | 0.793 | -0.525 | -0.525 | -0.5 |