Model info
| Transcription factor | REST | ||||||||
| Model | REST_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 22 | ||||||||
| Quality | A | ||||||||
| Consensus | bYCAGSACCdhGGACAGYdSYh | ||||||||
| wAUC | 0.9629669856410771 | ||||||||
| Best AUC | 0.9792739944433442 | ||||||||
| Benchmark datasets | 31 | ||||||||
| Aligned words | 499 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
| TF subfamily | unclassified{2.3.4.0} | ||||||||
| HGNC | 9966 | ||||||||
| EntrezGene | 5978 | ||||||||
| UniProt ID | REST_HUMAN | ||||||||
| UniProt AC | Q13127 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 60.614 | 65.543 | 108.195 | 264.848 |
| 02 | 8.577 | 98.876 | 33.931 | 357.816 |
| 03 | 15.274 | 435.429 | 19.274 | 29.222 |
| 04 | 442.976 | 20.374 | 21.906 | 13.944 |
| 05 | 25.697 | 14.871 | 457.022 | 1.609 |
| 06 | 43.787 | 325.624 | 85.114 | 44.674 |
| 07 | 461.795 | 12.619 | 19.627 | 5.159 |
| 08 | 10.912 | 460.612 | 21.908 | 5.768 |
| 09 | 10.322 | 445.871 | 18.913 | 24.093 |
| 10 | 283.338 | 50.804 | 75.955 | 89.102 |
| 11 | 73.797 | 152.287 | 49.442 | 223.673 |
| 12 | 10.089 | 5.5 | 480.305 | 3.305 |
| 13 | 9.4 | 11.193 | 477.02 | 1.587 |
| 14 | 440.05 | 37.231 | 14.001 | 7.918 |
| 15 | 4.279 | 408.71 | 65.729 | 20.482 |
| 16 | 474.675 | 8.469 | 9.016 | 7.04 |
| 17 | 8.378 | 6.056 | 477.897 | 6.867 |
| 18 | 45.185 | 360.292 | 44.944 | 48.778 |
| 19 | 89.716 | 18.656 | 220.094 | 170.734 |
| 20 | 45.478 | 334.233 | 93.098 | 26.39 |
| 21 | 54.788 | 366.94 | 16.175 | 61.297 |
| 22 | 137.246 | 221.348 | 60.908 | 79.698 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.709 | -0.633 | -0.141 | 0.746 |
| 02 | -2.524 | -0.23 | -1.27 | 1.045 |
| 03 | -2.016 | 1.241 | -1.803 | -1.412 |
| 04 | 1.258 | -1.751 | -1.684 | -2.098 |
| 05 | -1.534 | -2.04 | 1.289 | -3.688 |
| 06 | -1.025 | 0.951 | -0.377 | -1.006 |
| 07 | 1.299 | -2.188 | -1.786 | -2.935 |
| 08 | -2.316 | 1.297 | -1.684 | -2.848 |
| 09 | -2.365 | 1.264 | -1.82 | -1.595 |
| 10 | 0.813 | -0.881 | -0.489 | -0.332 |
| 11 | -0.517 | 0.197 | -0.907 | 0.578 |
| 12 | -2.384 | -2.886 | 1.339 | -3.258 |
| 13 | -2.445 | -2.294 | 1.332 | -3.695 |
| 14 | 1.251 | -1.181 | -2.095 | -2.591 |
| 15 | -3.076 | 1.178 | -0.63 | -1.746 |
| 16 | 1.327 | -2.534 | -2.481 | -2.688 |
| 17 | -2.543 | -2.81 | 1.334 | -2.708 |
| 18 | -0.995 | 1.052 | -1.0 | -0.92 |
| 19 | -0.325 | -1.833 | 0.562 | 0.31 |
| 20 | -0.988 | 0.977 | -0.289 | -1.509 |
| 21 | -0.808 | 1.07 | -1.964 | -0.698 |
| 22 | 0.094 | 0.568 | -0.705 | -0.442 |