Model info
| Transcription factor | Relb | ||||||||
| Model | RELB_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Consensus | vRGGGMTTTSMh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 28 | ||||||||
| TF family | NF-kappaB-related factors{6.1.1} | ||||||||
| TF subfamily | NF-kappaB p65 subunit-like factors{6.1.1.2} | ||||||||
| MGI | 103289 | ||||||||
| EntrezGene | 19698 | ||||||||
| UniProt ID | RELB_MOUSE | ||||||||
| UniProt AC | Q04863 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.651 | 4.196 | 13.081 | 3.085 |
| 02 | 3.949 | 2.098 | 20.979 | 0.987 |
| 03 | 1.974 | 0.987 | 25.051 | 0.0 |
| 04 | 4.936 | 0.0 | 23.077 | 0.0 |
| 05 | 9.996 | 0.0 | 18.017 | 0.0 |
| 06 | 12.587 | 12.217 | 0.0 | 3.209 |
| 07 | 1.111 | 0.0 | 2.962 | 23.94 |
| 08 | 0.987 | 0.0 | 3.949 | 23.077 |
| 09 | 0.987 | 3.579 | 0.0 | 23.447 |
| 10 | 3.949 | 18.017 | 4.936 | 1.111 |
| 11 | 6.047 | 19.991 | 1.974 | 0.0 |
| 12 | 9.132 | 10.736 | 3.085 | 5.06 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.079 | -0.444 | 0.574 | -0.693 |
| 02 | -0.494 | -0.983 | 1.024 | -1.46 |
| 03 | -1.026 | -1.46 | 1.195 | -2.241 |
| 04 | -0.306 | -2.241 | 1.116 | -2.241 |
| 05 | 0.323 | -2.241 | 0.878 | -2.241 |
| 06 | 0.538 | 0.51 | -2.241 | -0.662 |
| 07 | -1.394 | -2.241 | -0.725 | 1.151 |
| 08 | -1.46 | -2.241 | -0.494 | 1.116 |
| 09 | -1.46 | -0.574 | -2.241 | 1.131 |
| 10 | -0.494 | 0.878 | -0.306 | -1.394 |
| 11 | -0.13 | 0.977 | -1.026 | -2.241 |
| 12 | 0.24 | 0.39 | -0.693 | -0.285 |