Model info
| Transcription factor | Prdm14 | ||||||||
| Model | PRD14_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | dSWTAGRGMMYh | ||||||||
| wAUC | 0.777648129450664 | ||||||||
| Best AUC | 0.777648129450664 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | unclassified{2.3.3.0} | ||||||||
| MGI | 3588194 | ||||||||
| EntrezGene | 383491 | ||||||||
| UniProt ID | PRD14_MOUSE | ||||||||
| UniProt AC | E9Q3T6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 182.069 | 32.685 | 194.012 | 91.234 |
| 02 | 42.177 | 116.415 | 318.145 | 23.263 |
| 03 | 91.495 | 28.859 | 37.762 | 341.884 |
| 04 | 16.529 | 12.202 | 9.951 | 461.318 |
| 05 | 489.995 | 0.948 | 7.118 | 1.939 |
| 06 | 43.006 | 23.814 | 432.12 | 1.059 |
| 07 | 311.434 | 5.175 | 167.966 | 15.426 |
| 08 | 52.191 | 22.168 | 403.16 | 22.481 |
| 09 | 283.748 | 136.802 | 11.106 | 68.343 |
| 10 | 113.176 | 317.968 | 33.711 | 35.145 |
| 11 | 7.274 | 381.703 | 44.531 | 66.491 |
| 12 | 89.081 | 176.958 | 31.632 | 202.329 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.372 | -1.307 | 0.435 | -0.31 |
| 02 | -1.063 | -0.07 | 0.927 | -1.629 |
| 03 | -0.308 | -1.426 | -1.169 | 0.998 |
| 04 | -1.946 | -2.219 | -2.398 | 1.297 |
| 05 | 1.357 | -3.924 | -2.681 | -3.59 |
| 06 | -1.044 | -1.607 | 1.232 | -3.88 |
| 07 | 0.905 | -2.934 | 0.292 | -2.009 |
| 08 | -0.856 | -1.674 | 1.163 | -1.661 |
| 09 | 0.813 | 0.089 | -2.302 | -0.594 |
| 10 | -0.098 | 0.926 | -1.278 | -1.238 |
| 11 | -2.663 | 1.108 | -1.01 | -0.621 |
| 12 | -0.334 | 0.344 | -1.339 | 0.477 |