PRD14_MOUSE.H10DI.C motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

Prdm14

Model

PRD14_MOUSE.H10DI.C

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

ChIP-Seq

Model length

14

Quality

C

Consensus

ndSWTAGRGMMShn

wAUC

0.8016261451947589

Best AUC

0.8016261451947589

Benchmark datasets

1

Aligned words

511

TF family

More than 3 adjacent zinc finger factors{2.3.3}

TF subfamily

unclassified{2.3.3.0}

MGI

3588194

EntrezGene

383491

UniProt ID

PRD14_MOUSE

UniProt AC

E9Q3T6

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	8.8501
0.0005	10.6311
0.0001	14.1741

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	38.29	9.008	97.974	4.919	50.051	7.165	8.788	30.375	49.724	9.292	49.008	31.479	35.993	12.085	45.138	20.711
02	4.962	24.436	136.883	7.778	4.998	19.25	3.921	9.381	20.586	47.994	118.487	13.84	5.997	23.406	52.221	5.859
03	13.159	1.887	2.782	18.716	8.668	0.911	0.942	104.565	67.99	16.566	25.092	201.863	0.909	1.037	0.0	34.913
04	7.716	1.08	1.854	80.074	0.92	0.0	0.0	19.482	0.0	0.904	2.117	25.796	1.982	2.215	4.184	351.676
05	10.618	0.0	0.0	0.0	4.2	0.0	0.0	0.0	8.154	0.0	0.0	0.0	470.825	0.0	5.257	0.945
06	25.834	20.988	445.916	1.059	0.0	0.0	0.0	0.0	0.0	0.0	5.257	0.0	0.0	0.0	0.945	0.0
07	17.549	0.0	8.285	0.0	20.988	0.0	0.0	0.0	247.569	6.993	179.256	18.301	1.059	0.0	0.0	0.0
08	16.574	5.046	249.848	15.697	0.964	0.955	5.074	0.0	38.841	7.884	134.128	6.687	0.0	0.0	16.317	1.983
09	41.353	7.001	0.0	8.025	7.858	2.873	0.0	3.154	241.208	101.2	11.924	51.036	12.128	7.59	0.977	3.673
10	69.211	171.84	38.943	22.551	31.29	77.552	0.948	8.875	4.703	7.194	1.004	0.0	25.664	30.265	3.091	6.868
11	3.181	67.49	43.586	16.611	12.21	231.282	10.997	32.363	5.099	21.999	10.66	6.23	0.946	21.472	13.925	1.951
12	7.819	2.795	9.826	0.995	64.75	129.854	10.485	137.153	3.973	29.129	30.016	16.05	9.58	16.873	11.202	19.5
13	21.195	13.479	44.173	7.275	68.536	24.963	16.045	69.107	18.189	13.198	21.074	9.067	24.091	41.325	69.922	38.36

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	0.201	-1.214	1.134	-1.785	0.466	-1.432	-1.238	-0.028	0.46	-1.184	0.446	0.007	0.14	-0.931	0.364	-0.405
02	-1.777	-0.243	1.468	-1.354	-1.77	-0.477	-1.994	-1.175	-0.411	0.425	1.324	-0.799	-1.6	-0.285	0.509	-1.622
03	-0.848	-2.632	-2.3	-0.504	-1.251	-3.192	-3.169	1.199	0.771	-0.624	-0.216	1.855	-3.194	-3.1	-4.4	0.11
04	-1.362	-3.07	-2.647	0.933	-3.186	-4.4	-4.4	-0.465	-4.4	-3.198	-2.536	-0.189	-2.591	-2.497	-1.934	2.409
05	-1.056	-4.4	-4.4	-4.4	-1.931	-4.4	-4.4	-4.4	-1.309	-4.4	-4.4	-4.4	2.701	-4.4	-1.723	-3.166
06	-0.188	-0.392	2.647	-3.084	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-1.723	-4.4	-4.4	-4.4	-3.166	-4.4
07	-0.567	-4.4	-1.294	-4.4	-0.392	-4.4	-4.4	-4.4	2.059	-1.455	1.737	-0.526	-3.084	-4.4	-4.4	-4.4
08	-0.623	-1.762	2.068	-0.676	-3.152	-3.159	-1.756	-4.4	0.215	-1.341	1.447	-1.498	-4.4	-4.4	-0.639	-2.591
09	0.277	-1.454	-4.4	-1.325	-1.345	-2.272	-4.4	-2.189	2.033	1.167	-0.944	0.486	-0.927	-1.378	-3.143	-2.053
10	0.788	1.694	0.218	-0.321	0.001	0.902	-3.164	-1.228	-1.827	-1.429	-3.123	-4.4	-0.194	-0.032	-2.207	-1.473
11	-2.182	0.763	0.329	-0.621	-0.921	1.991	-1.022	0.035	-1.752	-0.346	-1.052	-1.565	-3.166	-0.37	-0.793	-2.604
12	-1.349	-2.296	-1.131	-3.13	0.722	1.415	-1.068	1.47	-1.981	-0.069	-0.04	-0.655	-1.155	-0.606	-1.004	-0.464
13	-0.382	-0.825	0.343	-1.418	0.779	-0.222	-0.655	0.787	-0.532	-0.845	-0.388	-1.208	-0.257	0.276	0.799	0.203